| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2163 |
|---|
| Symbol | |
|---|
| ID | 8368624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 2580500 |
|---|
| End bp | 2581213 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644984617 |
|---|
| Product | Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase |
|---|
| Protein accession | YP_003142268 |
|---|
| Protein GI | 256820989 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0313] Predicted methyltransferases |
|---|
| TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGATAC AAACAACGAT GGGAAATATT TATTTAATAC CGAACTTATT AGGGGGTGTA
GCTCTTGATG TATTGCCAGC ACAGGTGGCA AATGTAGTGC AATCACTTAC TTATTTTGTA
GTAGAAAACG AAAAGTCGGC AAGGAAGTTT ATCAAGCTCA TTACTCCGGA CAAGGTGCAA
GCAGATTTAA AAATAGTTGT GATAGATAAG CACCATCAGG ATACTGACTA TCAGAGTTTT
TTAACCCCTT GTATGGAAGG ACACTCGATA GGGATTATCT CGGAGGCAGG TTGCCCAGGG
ATAGCCGACC CAGGAGCTGA TATTGTGCGG GTGGCTCACC AAAAAGGACT GAAAGTGATT
CCGCTGGTAG GACCTTCTTC GTTGTTACTG GCAATGATGG CGAGTGGACT TAATGGGCAG
AATTTTGCTT TTAACGGATA TCTCCCTATT GATAAACAAG AGCGAAAGAA GGCACTTAAA
ACCTTAGAGC GCAAAGCACG AGAAGGACAG TCGCAACTAT TTATAGAAAC GCCTTACCGC
AATAAGCAAA TGCTTACTGA CTTGATAGAG ACATTACAGG CTAATACTCT TTTATGCGTG
GCTTGTGATA TTACGCTTCC TACTGAAGAA ATTAAAACAC TCCCTGTGCA TCGTTGGAAG
AAAACGAATA TTGATGTGCA GAAGAGACCT ACTATTTTTA TTATAGGGAG CTGA
|
|---|
| Protein sequence | MLIQTTMGNI YLIPNLLGGV ALDVLPAQVA NVVQSLTYFV VENEKSARKF IKLITPDKVQ
ADLKIVVIDK HHQDTDYQSF LTPCMEGHSI GIISEAGCPG IADPGADIVR VAHQKGLKVI
PLVGPSSLLL AMMASGLNGQ NFAFNGYLPI DKQERKKALK TLERKAREGQ SQLFIETPYR
NKQMLTDLIE TLQANTLLCV ACDITLPTEE IKTLPVHRWK KTNIDVQKRP TIFIIGS
|
|---|
| |