| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2156 |
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| Symbol | |
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| ID | 8368617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2571921 |
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| End bp | 2572637 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644984610 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_003142261 |
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| Protein GI | 256820982 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACGATA AAGTCCGAGC CATAGTTATT TCAAGTCTCA AATACAGCGA TAACAGTCTT
ATAGTGAAGT GCTTCACTCA AACGATGGGT ACTCGTAGCT ATTTGTTACA AGGCGTTTTA
GCACAGAAGA AAGGGAACTT AAAAACAGCC CTTTTTCAGC CTTTTATGCT GTTAGAACTG
GTGGCTACCC ATAAAAATAA CGGTACGTTA GGACGTGTAA AGGAAGCTAA GATAGCCGTC
CCTTATTACT CGTTACATAC TGATATGTAC AAGAGTGCTG TAAGTATGTT TCTTTCTGAA
GTATGTGCTT TTGTTTGCAC ATCTGAAGCT CCCGATGAAG AAATGTTTTT GTTTTTAGAA
CAGAAGCTCC TTTTTTTTGA TAGAAACGAC TTCTCTGCCA ATTTTCACTT AAAGTTTCTG
CTTGATATCA CTCGCTATCT TGGCTTTTAC CCCGATACCA CTCACGAGCA TTTGCCCTCC
TTTTCGTTGG AAGACGGTAT TTTCACTACT ACCGATGAAA GCAAATACAC CATTGCAGGC
ACTACCTTGT TGCTATTCAA AACCCTCCTA CACACCGATT ATCCTCAGTT ATCAACCGTT
AAAAGCAATA AGAACGAGCG CAATGCATTG CTTTTTCAAC TGCTTAAATA CTACGAATGG
CACTTCCCCA GTTTTAGACA AATAAAATCA TTAGAGGTGC TACAAACGCT CTTTTAG
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| Protein sequence | MYDKVRAIVI SSLKYSDNSL IVKCFTQTMG TRSYLLQGVL AQKKGNLKTA LFQPFMLLEL
VATHKNNGTL GRVKEAKIAV PYYSLHTDMY KSAVSMFLSE VCAFVCTSEA PDEEMFLFLE
QKLLFFDRND FSANFHLKFL LDITRYLGFY PDTTHEHLPS FSLEDGIFTT TDESKYTIAG
TTLLLFKTLL HTDYPQLSTV KSNKNERNAL LFQLLKYYEW HFPSFRQIKS LEVLQTLF
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