| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2129 |
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| Symbol | |
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| ID | 8368590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2547486 |
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| End bp | 2548850 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644984583 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_003142234 |
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| Protein GI | 256820955 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.124782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAC TAAAAACAGC ATATTTCTGT CAGAATTGCG GAGCACAATA CAGCAAATGG
CAAGGACAGT GTTACGTCTG CAAGCAGTGG AATACCATTG TGGAAGAAGT CGTACAGAAA
GACACTGCTC CTGCTTGGCA AGAGAAAGAA TCACCTATCA AGAGTAAAGC TCCTAAGTAT
ATCTCTATTT CGCAAATCGA TACACAACAG GAGGCGCGCC TCAATAGCAA CAACCACGAA
TTGAATAACG TTTTGGGTGG TGGAATTGTA CCGGGGTCGG TTACTCTTTT AGGGGGTGAA
CCTGGCATTG GCAAGAGTAC GCTACTGCTA CAAATAGCTC TTAACTTGCC TTATCGTACC
CTCTACGTAT CGGGGGAGGA AAGTGAGAAA CAGATAAAAA TGCGCGCTGA CCGCATTCCG
CATAAGCTCG ATAATTGCTT TATCCTCACT GAAACTAAGA CGCAAAATAT CTTTCAGCAG
ATAAAAGAAC TCTTGCCCGA AATCGTGATT ATCGACTCTA TCCAAACCCT TCAATCTGAT
TATATAGAGG CATCAGCAGG GAGTATTTCT CAAATTAGGG AATGTGCCTC CGAACTGATT
AAGTTTGCTA AAACTACTCA CACTCCTGTA ATACTCATTG GGCATATCAC TAAGGACGGA
CAAATAGCAG GACCTAAGAT ATTAGAGCAT ATGGTCGATA CGGTTTTGCA GTTTGAAGGC
GACCGTAATC ACGTGTACCG TATCTTGCGT TCACTGAAAA ACCGCTTTGG CTCTACTTCC
GAACTAGGTA TTTACGAGAT GCTTAGCAAC GGATTGCGTG AGGTAAATAA TCCTTCGGAG
ATTCTCATTT CCAAAACCGA TGAGACGATT AGCGGTACCT CCATAGCTGC CACTTTGGAA
GGTATGCGTC CGCTGATGAT TGAAATACAA GCACTCGTAA GTACAGCGGT ATATGGAACA
CCACAACGCA GTACTACGGG CTTCAATGCC AAACGCCTCA ATATGCTTTT GGCAGTGCTT
GAGAAACGCG CAGGATTCCG CTTAGGAGCT AAGGACGTCT TCCTTAATAT TACCGGAGGC
ATTACTATCG ACGACCCCGC CACTGACTTA GGAGTGGCGA TGGCTATCCT ATCTTCTAAC
GAAGATATAG CAATTGAAAA GGACGTCTGT TTTGCCGGCG AAGTAGGATT AGGCGGTGAA
ATACGCCCTG TACAACGCGT AGAGCAACGC ATTACAGAAG CTGAGAAATT AGGCTTCAAC
ACTATTTTTG TATCAAAATA TAACAAAATA GCCCTTAAAA ATACTAAAAT TAGGATTGTA
AAAGTTGCCA AGATAGAAGA TGCAATACAA GAACTATTTG GATAA
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| Protein sequence | MAKLKTAYFC QNCGAQYSKW QGQCYVCKQW NTIVEEVVQK DTAPAWQEKE SPIKSKAPKY
ISISQIDTQQ EARLNSNNHE LNNVLGGGIV PGSVTLLGGE PGIGKSTLLL QIALNLPYRT
LYVSGEESEK QIKMRADRIP HKLDNCFILT ETKTQNIFQQ IKELLPEIVI IDSIQTLQSD
YIEASAGSIS QIRECASELI KFAKTTHTPV ILIGHITKDG QIAGPKILEH MVDTVLQFEG
DRNHVYRILR SLKNRFGSTS ELGIYEMLSN GLREVNNPSE ILISKTDETI SGTSIAATLE
GMRPLMIEIQ ALVSTAVYGT PQRSTTGFNA KRLNMLLAVL EKRAGFRLGA KDVFLNITGG
ITIDDPATDL GVAMAILSSN EDIAIEKDVC FAGEVGLGGE IRPVQRVEQR ITEAEKLGFN
TIFVSKYNKI ALKNTKIRIV KVAKIEDAIQ ELFG
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