| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2128 |
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| Symbol | |
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| ID | 8368589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2546055 |
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| End bp | 2547473 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644984582 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003142233 |
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| Protein GI | 256820954 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00415238 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAA AACTTTTTAA AGATACCATT ATCTACGGCA TTGCTACTGT ACTCCCTCGT
GTGCTTACCC TATTGCTCAC AAGGTTGTAC GTGAATAAAC TCGATACTGC CGATTTTGGT
ATCTATTCAG GGTTGTTTGT CTATCTTATC TTGGGGAACG TACTGCTATC ATACGGTATG
GAAACAGCTT TCTTCCGCTT TATGAACAAA GGCGAACGGA AGAAGAAGGT ACAATCTACT
GCACTTACTT CTCTTACAGT CAGCTCTTTG TTTTTCCTGC TGATTGCCTA CTTATTGCGA
CACTTTATTG CCTCCTGGCT GAACTACGAT GTACAGTATA TTGTCTTTGC CATTTATATA
TTAGTACTCG ATGCCTTAGT GGTTATTCCG TTTGCGTGGC TCAGGAACAA AGGCAAAGCC
AAACTTTATG CTATTGTTAA AATAGGGAAT ACAGCAGTGA ATTTAGCTCT TAACATTTAC
TACCTGAACT ATTTACCTGC TGAAACCCTT GCTACCAACG GTGGTGTATA TTATATCTTT
TTAGCCAACG TAATAGCGAG TTTAGCGACT TTCATTGTCT TGTTGCCTAT CTATTTCAAA
ATACATTTCC GTTTTGATTA TCGACTTTGG AAAGAGATGA TGATTTATGC TTTCCCTGTA
TTATTGGCAG GTATTGCTTT TGCCGTAAAC GAAGGTTTTG ACCGAGTGTT CTTGCGTATG
CTCCTTCCCG CTGATACTGC CGATGGAACT ATAGGTATTT ATTCTGCTTG TTACAAAATG
GGGGTATTTA TGAACCTCTT TGTTACTGCT TATAAACTTG GTATAGAACC TTTCTTTTTC
AGCAGTGCAC AGGATAAGAA TGCGCCTAAA ACCTATGCTC GTATCACTGA ATATTTCATT
GTTTGCGGAG GCTTTATTTT GCTCTTTATT ACCGTATTCA CTGATGTTTT TAAACTTATT
TTGATACCTA ACAAAGCCTA TTGGGAAGCC CTTTGGATTG TACCTATTAT CTTGTTAGCT
AACCTTTGTT TGGGTATTTA CCACAGTCTT TCGGTGTGGT ACAAAGTAAC CGACCGTACC
AGTTTCGGGG CTATCGTATC CTTAGTAGGA ATGGCTATTA CGGTAGTGTT CAACTTTGCG
CTTATTCCTT GGCTCAGTTA TAAAGGGGCG GCGTTAGCAA CACTCATCAC CTATGGGGCG
ATGATGTTTA TTTCGTATTA CTACGGACAA AAATACTATC CGATACCCTA TAAAAAAAGG
AAGATAAAAA TCTTCCTTGG AATGAGTGTT GTTTTCTCAT TTGTAAATTT CTATGCTTTT
GACAATAGTA TCTACATAGG CACCTTACTT TTGCTTATTT ATGGTTATTT AGCGAGTTTT
ACTATAAAGC TCAAATCTAC TCTTCCTAAA CAACCGTAA
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| Protein sequence | MLKKLFKDTI IYGIATVLPR VLTLLLTRLY VNKLDTADFG IYSGLFVYLI LGNVLLSYGM
ETAFFRFMNK GERKKKVQST ALTSLTVSSL FFLLIAYLLR HFIASWLNYD VQYIVFAIYI
LVLDALVVIP FAWLRNKGKA KLYAIVKIGN TAVNLALNIY YLNYLPAETL ATNGGVYYIF
LANVIASLAT FIVLLPIYFK IHFRFDYRLW KEMMIYAFPV LLAGIAFAVN EGFDRVFLRM
LLPADTADGT IGIYSACYKM GVFMNLFVTA YKLGIEPFFF SSAQDKNAPK TYARITEYFI
VCGGFILLFI TVFTDVFKLI LIPNKAYWEA LWIVPIILLA NLCLGIYHSL SVWYKVTDRT
SFGAIVSLVG MAITVVFNFA LIPWLSYKGA ALATLITYGA MMFISYYYGQ KYYPIPYKKR
KIKIFLGMSV VFSFVNFYAF DNSIYIGTLL LLIYGYLASF TIKLKSTLPK QP
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