Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_2125 |
Symbol | |
ID | 8368586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2544094 |
End bp | 2545332 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644984579 |
Product | protein of unknown function DUF214 |
Protein accession | YP_003142230 |
Protein GI | 256820951 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000881694 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATGTTG AATATTTCAT AGCAAAAAGA GTTATTTTTT CGAAAGGGGA CAAAGGTACA ATTTCTTCCC CAATTATCAA AATGGCAATA GCTGCCATTG CTGTGGGTAT GGTGATGATG CTCATTGCCA TTGCTACGGG TATTGGCTTG CAACGCAAGA TTAGGGAGAA GTTGGTAGTC TTTCACGGGC ACATTCAGAT TTTTGATTAT AGCAATAATA TATCAGAGGT TAGTACTAAA CCTATTAAGT TACAACAAGA TTTTTACCCT ACTTTTTCAG CAGTACCCGA AGTTACCCAT ATTCAAGCAG TAGCTACCAA AGGTGGTATC ATCCGTACTG AAACCACTTA TGAATCGATT CTCGCTAAAG GTGTGGGAAA AGACTACAAT TGGTCGCTTA TTCGCGATTT TATTACCGAA GGACGCACCC CTAATGTAGC GAGTGAAGAA GTAACCGATG AGGTGCTAAT GTCTACCTAT TTAGCCAACA GATTGCACCT AAAACTGGGC GACCGTTGCC AAGCTATCTT TTTAAAAGAC GAAGCTGCCC AAGCTCCTAA CCAACGTAGT TTTAAAATCG TAGGACTTTA CAATAGTGGC TTTCAAGAAT TTGATGCGTC GTACGTCTTC ACTGATATAC GTCATATTCA GAAAATTAAT AAATGGCAAC CTGACCAAAT AGGCAATTTC GAGCTTTTTA TCAAAGATTT TGACCGTATA GAAGAAGTAG GCAAACAAGT GTACGGCAAG GTAGGTTCAT TCCTCGATTC GCAAACTATC ATTCAGAAGT TTCCTTTTAT CTTCGAATGG CTTGGTATGT TCGATTTCAA TATTTACCTC ATCATCGGGA TAATGATAGT TGTTGGTGGA TTTAATATGA TTACGGCTAT TCTCGTGCTC ATATTGGAGA AAACACCAAT GATAGGTACT TTAAAGAGCT TAGGTGCTTC TGACCGCAGT ATCCGCAAGA TATTTTTGTA TAATGCTACC TATATCATAG GCTTGGGACT CTTATGGGGG AATGTTTTAG GATTCTTATT GCTCTGGTTA CAACAGCGTT ACAGCCTTAT CAAGTTAGAC CCTGCCACCT ATTATGTAAC CGAAGTACCG ATTGCTTTCA CTCCTCTGTG GGTGTTATTG CTCAATATAG GCGTTTTGCT ATTGTGCTTG CTAATGCTAC TCATTCCTAC CTATGTGATT ACCAAAATAT CACCTACTAA ATCTATGAAG TTTGCGTAA
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Protein sequence | MNVEYFIAKR VIFSKGDKGT ISSPIIKMAI AAIAVGMVMM LIAIATGIGL QRKIREKLVV FHGHIQIFDY SNNISEVSTK PIKLQQDFYP TFSAVPEVTH IQAVATKGGI IRTETTYESI LAKGVGKDYN WSLIRDFITE GRTPNVASEE VTDEVLMSTY LANRLHLKLG DRCQAIFLKD EAAQAPNQRS FKIVGLYNSG FQEFDASYVF TDIRHIQKIN KWQPDQIGNF ELFIKDFDRI EEVGKQVYGK VGSFLDSQTI IQKFPFIFEW LGMFDFNIYL IIGIMIVVGG FNMITAILVL ILEKTPMIGT LKSLGASDRS IRKIFLYNAT YIIGLGLLWG NVLGFLLLWL QQRYSLIKLD PATYYVTEVP IAFTPLWVLL LNIGVLLLCL LMLLIPTYVI TKISPTKSMK FA
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