Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_2124 |
Symbol | |
ID | 8368585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 2542869 |
End bp | 2544086 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644984578 |
Product | hypothetical protein |
Protein accession | YP_003142229 |
Protein GI | 256820950 |
COG category | [S] Function unknown |
COG ID | [COG3876] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000646964 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTTTTA GAAGTGCCAA AGTTACACTT TTTTTCTTAT GTACGCTTAT ATCGTGCAAA AATAATGGAC AGACACAAGG TAATGCTTCT GTGCAAAACA CTGAAAAACA GACGAAAGAA GTGGTGGTAG GCGCTAACCG AATGTATCTT TACATTAAGG ATTTACGCGC TAAAAATATA GCTATCGTTA CGAATCAGAC TGGGATTGTG AAAGCCGAAA AAGGGAATTA TGTGCATTTG GTGGATACGT TATTAAAGAA GAAAGTATCT ATCAGCAAGG TTTTTGCTCC TGAACACGGA TTCAGAGGGG AAGCCGATGC AGGTGAAGTA GTGAAAGACG GCAAGGACTC TAAAACCGGC TTGCCTATTG TATCGCTCTA TGGTAAAAAC AAAAAACCTA CTGCTGAGCA ACTGAAAGGT GTAGACCTTG TACTTTTTGA TTTGCAAGAT GTAGGGGTGC GCTTTTACAC TTATATTTCT ACTTTGCATT ATGTGATGGA GGCTTGTGCT GAACAGCATA TTCCTGTAAT AGTACTCGAC CGTCCGAATC CTAATGCGCA TTACATTGAT GGAGCGGTGT TGCAACCTGC TTTTAAGAGT TTTATTGGGA TGCACCCTGT ACCCGTGGTT TATGGAATGA CTATTGGCGA ATATGCTCAG ATGATAAATG GTGAAAAGTG GTTGCAAGCA GGCGTTACTG CTGACCTTAA AGTGATTCCT CTTGCCTATT ATACACATCA AACGTCTTAT AGCTTACCGG TAAAACCTTC GCCTAACTTA CCTAATGATG TATCGGTGAA CTTGTACCCA AGTTTGTGTT TTTTTGAGGG GACAAATGTG AGTATGGGGC GCGGTACCGA TATGCAGTTT CAGATTTATG GCTCTCCTTA TTTTGATAAG ACGGCTTTTA GCTTTACGCC ACACCCTAAT GCAGGCGACA AGAATCCGAA GTTTAACGGT GAGCTATGTT ACGGTGAGGA CTTGAGAAAA ACGCCTCGTT TGGATAAACT AAATCTCACT TGGCTTAAAA AAGCTTTTGA GCAAGGCAAA GGAGTGAAAA CACCTTTCTT TACTTCATCG TTCAATAAGA TTGCTGGTAA TGATATATTA AAGAAGCAAA TAAGCGAAGG GAAGACCGAA GACGAAATAC GCCAATCGTG GAAAAAGGAT ATAGAGCAGT TTAAGGAGAT GAGAAAGAAA TATTTACTAT ATCCATAA
|
Protein sequence | MPFRSAKVTL FFLCTLISCK NNGQTQGNAS VQNTEKQTKE VVVGANRMYL YIKDLRAKNI AIVTNQTGIV KAEKGNYVHL VDTLLKKKVS ISKVFAPEHG FRGEADAGEV VKDGKDSKTG LPIVSLYGKN KKPTAEQLKG VDLVLFDLQD VGVRFYTYIS TLHYVMEACA EQHIPVIVLD RPNPNAHYID GAVLQPAFKS FIGMHPVPVV YGMTIGEYAQ MINGEKWLQA GVTADLKVIP LAYYTHQTSY SLPVKPSPNL PNDVSVNLYP SLCFFEGTNV SMGRGTDMQF QIYGSPYFDK TAFSFTPHPN AGDKNPKFNG ELCYGEDLRK TPRLDKLNLT WLKKAFEQGK GVKTPFFTSS FNKIAGNDIL KKQISEGKTE DEIRQSWKKD IEQFKEMRKK YLLYP
|
| |