Gene Coch_2124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2124 
Symbol 
ID8368585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2542869 
End bp2544086 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content40% 
IMG OID644984578 
Producthypothetical protein 
Protein accessionYP_003142229 
Protein GI256820950 
COG category[S] Function unknown 
COG ID[COG3876] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000646964 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTTA GAAGTGCCAA AGTTACACTT TTTTTCTTAT GTACGCTTAT ATCGTGCAAA 
AATAATGGAC AGACACAAGG TAATGCTTCT GTGCAAAACA CTGAAAAACA GACGAAAGAA
GTGGTGGTAG GCGCTAACCG AATGTATCTT TACATTAAGG ATTTACGCGC TAAAAATATA
GCTATCGTTA CGAATCAGAC TGGGATTGTG AAAGCCGAAA AAGGGAATTA TGTGCATTTG
GTGGATACGT TATTAAAGAA GAAAGTATCT ATCAGCAAGG TTTTTGCTCC TGAACACGGA
TTCAGAGGGG AAGCCGATGC AGGTGAAGTA GTGAAAGACG GCAAGGACTC TAAAACCGGC
TTGCCTATTG TATCGCTCTA TGGTAAAAAC AAAAAACCTA CTGCTGAGCA ACTGAAAGGT
GTAGACCTTG TACTTTTTGA TTTGCAAGAT GTAGGGGTGC GCTTTTACAC TTATATTTCT
ACTTTGCATT ATGTGATGGA GGCTTGTGCT GAACAGCATA TTCCTGTAAT AGTACTCGAC
CGTCCGAATC CTAATGCGCA TTACATTGAT GGAGCGGTGT TGCAACCTGC TTTTAAGAGT
TTTATTGGGA TGCACCCTGT ACCCGTGGTT TATGGAATGA CTATTGGCGA ATATGCTCAG
ATGATAAATG GTGAAAAGTG GTTGCAAGCA GGCGTTACTG CTGACCTTAA AGTGATTCCT
CTTGCCTATT ATACACATCA AACGTCTTAT AGCTTACCGG TAAAACCTTC GCCTAACTTA
CCTAATGATG TATCGGTGAA CTTGTACCCA AGTTTGTGTT TTTTTGAGGG GACAAATGTG
AGTATGGGGC GCGGTACCGA TATGCAGTTT CAGATTTATG GCTCTCCTTA TTTTGATAAG
ACGGCTTTTA GCTTTACGCC ACACCCTAAT GCAGGCGACA AGAATCCGAA GTTTAACGGT
GAGCTATGTT ACGGTGAGGA CTTGAGAAAA ACGCCTCGTT TGGATAAACT AAATCTCACT
TGGCTTAAAA AAGCTTTTGA GCAAGGCAAA GGAGTGAAAA CACCTTTCTT TACTTCATCG
TTCAATAAGA TTGCTGGTAA TGATATATTA AAGAAGCAAA TAAGCGAAGG GAAGACCGAA
GACGAAATAC GCCAATCGTG GAAAAAGGAT ATAGAGCAGT TTAAGGAGAT GAGAAAGAAA
TATTTACTAT ATCCATAA
 
Protein sequence
MPFRSAKVTL FFLCTLISCK NNGQTQGNAS VQNTEKQTKE VVVGANRMYL YIKDLRAKNI 
AIVTNQTGIV KAEKGNYVHL VDTLLKKKVS ISKVFAPEHG FRGEADAGEV VKDGKDSKTG
LPIVSLYGKN KKPTAEQLKG VDLVLFDLQD VGVRFYTYIS TLHYVMEACA EQHIPVIVLD
RPNPNAHYID GAVLQPAFKS FIGMHPVPVV YGMTIGEYAQ MINGEKWLQA GVTADLKVIP
LAYYTHQTSY SLPVKPSPNL PNDVSVNLYP SLCFFEGTNV SMGRGTDMQF QIYGSPYFDK
TAFSFTPHPN AGDKNPKFNG ELCYGEDLRK TPRLDKLNLT WLKKAFEQGK GVKTPFFTSS
FNKIAGNDIL KKQISEGKTE DEIRQSWKKD IEQFKEMRKK YLLYP