Gene Coch_2122 details

Gene Information

• Locus tag: Coch_2122
• ID: 8368583
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 2541581
• End bp: 2542165
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 644984576
• Product: hypothetical protein
• Protein accession: YP_003142227
• Protein GI: 256820948

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000000123592
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAACA AAATCACTAA ATTAACAGCT TTTATTGCGA TAATGCTACT CACCACCGCT 
ACCTATGCTC AAGAGTTTCA CTTAGGAGCA AAAGCAGGTG CTAACTTAGG TAAAGTAGAA 
GGTGTAGCCT ATGACAAAAA CTTTAAATTG GGCTATCAAT TAGGTGGTTT CGTCGAATTC 
GATTTCAATG ATAGCTGGGG GCTACAGGGG GAAGTACTCT TTAGTCAAAC CAATACAGAG 
CTCCGCGATA GCTACCAATC TGTTTGGAAC GATAAGTTCG AAAAGAAAAA AACACTGAAC 
TACGTAAGTG TACCAGTACT CTTCAAATAC AACCCTAACG GATTGATTTC ACTACACGCA 
GGACCTCAAT TTAGTTTCCT TGCCAACCGC GACCAAAGTA CTTGGGAAAA CGGAGAAAAG 
CTCTTTAAAG ATACTGATTT TTCATTAGTA GCAGGAGCCG AAGTAAATTT AGGTCCTCTT 
TTTGCTTACG GTCGCTATGT ATGGGGTTAC AGTGATATTA GTAACGCCCT TAAAGAAAAA 
GCAACCACCC AACAAATACA ATTGGGCGTA GGGGTACGTT TTTAG 

 

Protein sequence

MKNKITKLTA FIAIMLLTTA TYAQEFHLGA KAGANLGKVE GVAYDKNFKL GYQLGGFVEF 
DFNDSWGLQG EVLFSQTNTE LRDSYQSVWN DKFEKKKTLN YVSVPVLFKY NPNGLISLHA 
GPQFSFLANR DQSTWENGEK LFKDTDFSLV AGAEVNLGPL FAYGRYVWGY SDISNALKEK 
ATTQQIQLGV GVRF