Gene Coch_2108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2108 
Symbol 
ID8368569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2525032 
End bp2525850 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content45% 
IMG OID644984562 
Productdihydropteroate synthase 
Protein accessionYP_003142213 
Protein GI256820934 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATAA ACTGTAAAGG AGAGCTTCTC TCTATGGATA CCCCGCGAGT GATGGGAATC 
CTTAATCATA CCCCCGACTC TTTCTACGAA GGAAGTCGTG TAACCGAAAA AACACTCTTA
CAACGCGCAG AAACAATGCT CGCTCAGGGC GCAGATTTTA TTGATGTGGG TGGTTATAGC
ACCCGCCCCA ATGCACCCGA AGTCTCACAA ACCGAAGAAC TCAGTAGGGT AGTGCCCGTA
GTGCGCTCTT TGGTGCAACA TTTCCCCGAG ATACGTATCT CGGTAGATAC TTTCCGCAGT
GAGGTAGCAC GCCAATCGCT CTTAGAAGGG GCTTGTATTA TCAATGATAT TTCTGCCGGA
CTCTTAGATG AGCAGATGTT GGCTACAGTA GCGCAATTTC AGGTGCCTTA TATTGCGATG
CACCTCGTAG GTACACCCCA AACAATGCAA CAGCACACTG ATTATAAGGA TATCATCAGT
GATATGCGCT ACTATTTTTC TGAGCGCAAA GCTTTAGCTT TGCAAGCGGG GATTAACGAT
TTTATAGTAG ATGTAGGCTT TGGTTTCTCT AAAACCTTAG ACCAGAATTA CGAAGTGTTG
AAGCACTTAG AGCTATTCCA TAGCTTTGGT TGTCCGCTAT TGGTAGGTTT TTCCCGCAAG
TCGATGTTGT ACAAATTGTT AGAAACTGAC CCTGCTGGTG CGCTGAATGC TACGACAGTA
GTCAATACCA TAGCCCTGAT GAAAGGGGCA CACATTTTGC GGGTACACGA TGTAAAAGAA
GCTAAAGAAT GTGTAACACT CTTTGAAAAA ATACAATGA
 
Protein sequence
MTINCKGELL SMDTPRVMGI LNHTPDSFYE GSRVTEKTLL QRAETMLAQG ADFIDVGGYS 
TRPNAPEVSQ TEELSRVVPV VRSLVQHFPE IRISVDTFRS EVARQSLLEG ACIINDISAG
LLDEQMLATV AQFQVPYIAM HLVGTPQTMQ QHTDYKDIIS DMRYYFSERK ALALQAGIND
FIVDVGFGFS KTLDQNYEVL KHLELFHSFG CPLLVGFSRK SMLYKLLETD PAGALNATTV
VNTIALMKGA HILRVHDVKE AKECVTLFEK IQ