Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_2100 |
Symbol | |
ID | 8368561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2515997 |
End bp | 2516905 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644984554 |
Product | NLP/P60 protein |
Protein accession | YP_003142205 |
Protein GI | 256820926 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.660776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGTAT TAAGAATTTT AGGTTTATTT ACACTACTAC TCAGCTTATC TTCCTTTTCA GAGGCAGTAA AGAATACCGA AAAGAGTGTA GTTGTAAATA CAGCTACCAC AAAGGCTGTG GAAAATAAGA GTAAGCCTAA AAAGAAAACA TTTTCTCCTC CTAAGAAAGG GAGAAAAGCT ACTACTAGAG TGGCTACAAC AACTAAAAAA CGTCATAAGT TACCTCCTAA ACGCAGTGTA GCTCATCATT CTGCCAAAAA GTCTGTAAAA AAAGCTCCTG TTAAGAGAGC TTTAGCTATA ACTGATAAAA AGAAAAAGCC TGTAAAAGCA GATATAGCTG TTGCTAAGAG TAAGAGATAT GCTCCTAAAA AACACACCGG TAATAAAGCC CTAAAACAAT ACGCTGAGAA TACTCTCGCA GACACTGAAT TGGAAGACGA CTTAGAAGAC GAAGAACTAT TTGAGGAACC TGAAAGCTAT GAAACTACCG ATATAGCGCT TACTGCACTC TCTAAAAGTA AAGCAGATAC CAAACAACAG AAAGTATTAT TAGATACAGC TTTCTCATAT TTAGGAACTC CTTACAGACA CGGAGGTGTT ACCCGTAATG GTATGGATTG TTCTGGTTTT GTAAGTACTA CTTTCAAATC TATTTCAGTA CCATTATCTC GCTCCTCACA AGAAATGGCT ACACAAGGAA CTAAAATTGA CTTGGAAGAT GTAAAAGTAG GCGATTTACT TTTCTTCAGA ACAACTAGGA AAAGCAGAAT ATCACACGTA GGTATGGTAG TAGATATAGA TGGAGATATT AAATTCATAC ACTCTTCCTC TAAAAGAGGA GTTGTGATTT CTTCATTAAG TGATGAATAT TACAAGAAAA CATTTCGTAT GGCAAAACGT GTAATGTGA
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Protein sequence | MYVLRILGLF TLLLSLSSFS EAVKNTEKSV VVNTATTKAV ENKSKPKKKT FSPPKKGRKA TTRVATTTKK RHKLPPKRSV AHHSAKKSVK KAPVKRALAI TDKKKKPVKA DIAVAKSKRY APKKHTGNKA LKQYAENTLA DTELEDDLED EELFEEPESY ETTDIALTAL SKSKADTKQQ KVLLDTAFSY LGTPYRHGGV TRNGMDCSGF VSTTFKSISV PLSRSSQEMA TQGTKIDLED VKVGDLLFFR TTRKSRISHV GMVVDIDGDI KFIHSSSKRG VVISSLSDEY YKKTFRMAKR VM
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