| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2092 |
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| Symbol | |
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| ID | 8368553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2505487 |
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| End bp | 2506902 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644984546 |
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| Product | protease Do |
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| Protein accession | YP_003142197 |
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| Protein GI | 256820918 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA ATTATGCAAC AATGATAGCT ACTGCCTTTC TCGGCGGGGC TATGACCTTA
GGAGGGTATA AACTCTTTAT AGATAAACAC GACGCCAAAC AAGAAGCGCT AGAGCTACTC
TCACGTCCTG CTTTGGTACA AACTAATCAC ACTACTCCTG AAAGAACGGT AGCAGGTGAA
ACCAACTTTG TGGAAGCAGC TAACAAAACG GTGAATAGCG TAGTGCACGT AAAGAACACT
GTAAAATCAC AAGGAGGCGT TACCTCTATC TTCGACCTTT TTTACGGTAA TGGTGGAGGC
GAACAAACCC AAGTAGGTAC AGGCTCTGGG GTTATCATTA CCCCCGATGG CTATATAGTA
ACCAATAACC ACGTGATTGC CAACGCTACT ACTTTGGAGG TTACTCTCAA CAACAATAAA
ACTTATACTG CTAAACTTAT TGGCACAGAT GCTTCTTCGG ATATTGCCCT ACTGAAAATA
GAAGCCGACG AAAAGCTACC TTTTCTCACC TTTGCCGACT CCGATAACAC ACAAGTAGGC
GAATGGGTGC TCGCAGTAGG GAATCCTTTT AACTTGAATT CTACCGTTAC TGCGGGAATC
ATCAGTGCGA AAGCGCGTAA CATCAGCGAG CGCGGTAGCG ATAAAATAGA ATCATTTATA
CAAACCGATG CCGTGGTGAA TATGGGAAAC AGTGGGGGAG CTTTAGTAAA CCTCAACGGT
GATCTCATTG GTGTCAATAC AGCTATCTCA TCTACTACGG GTGTGTATAT GGGCTACTCG
TTTGCAGTGC CTAGTAATAT CGCTAAGAAA GTGGTGGAAG ACCTTATAGA GTACGGAAAT
GTACAACGAG GAGTGATGGG CGTGCGCGGA CAAGGGTTAG ACTCTGAAGT AGCTAAAAAA
CTCAACATCA AAGAAACTGA AGGATTCTAT GTAGATTCAG TAGACGATGA GTCAGGGGCT
GGTAGTGCTG GACTTAAAAA AGGTGACATC ATCAAGCAAA TTGACAATGT GAAGATACAT
AAATACTCTG ATCTTAGTGG TCACATCGCT TCTAAACGTC CTGGTGATAT GTTAAAAGTA
ACTTACGTAC GCGAAGGTAA AGAACGCACC GCCAATATTA CCCTTAAGAA AAATACTACT
TATGTGATAC AATCCTTAGG TTTGGAAGTG AAAAACCTTT CAGATGCTGA CCAAAAGCGA
TTTAGAACTA AAAACGGAGT GAAGGTAACC GCTGCTGGAC AGTTCTATGA GTACAATAAT
ATCAATATAG TGGGGAAAGT GTTACTTTCA GTGAATGGAA AGACCATTAA GGATGTAGAT
GAATTGAAAA ATGTAATGTC TACCCTTTCT TCACGCAATC GTAACTCGTT AGAAATCTTG
AACGAAAAAG GAGAAAAAGA AAGATTCTTT TTCTAA
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| Protein sequence | MMKNYATMIA TAFLGGAMTL GGYKLFIDKH DAKQEALELL SRPALVQTNH TTPERTVAGE
TNFVEAANKT VNSVVHVKNT VKSQGGVTSI FDLFYGNGGG EQTQVGTGSG VIITPDGYIV
TNNHVIANAT TLEVTLNNNK TYTAKLIGTD ASSDIALLKI EADEKLPFLT FADSDNTQVG
EWVLAVGNPF NLNSTVTAGI ISAKARNISE RGSDKIESFI QTDAVVNMGN SGGALVNLNG
DLIGVNTAIS STTGVYMGYS FAVPSNIAKK VVEDLIEYGN VQRGVMGVRG QGLDSEVAKK
LNIKETEGFY VDSVDDESGA GSAGLKKGDI IKQIDNVKIH KYSDLSGHIA SKRPGDMLKV
TYVREGKERT ANITLKKNTT YVIQSLGLEV KNLSDADQKR FRTKNGVKVT AAGQFYEYNN
INIVGKVLLS VNGKTIKDVD ELKNVMSTLS SRNRNSLEIL NEKGEKERFF F
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