Gene Coch_2086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2086 
Symbol 
ID8368547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2500701 
End bp2501360 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content37% 
IMG OID644984540 
ProductMethyltransferase type 11 
Protein accessionYP_003142191 
Protein GI256820912 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG0500] SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.39993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCTC CAGTAACCGA TATGCAACTT TTAGGACAGT TATTGCGTTG CCCCAGCGGA 
ATATATGCAA AAGAAGTAGG TGAATATACT TTCTTTTCCA ATCGCACTAT GATTTTCAAT
ACGATTGACT GTTTATCACT TTTGCCCAAT AGCAATGTTT TAGAAATTGG CTTCGGCAAT
GCCAGCCATT TACCTTATTT ATTTGAAAAA GAGCCAACCA TTCACTATAC AGGAGTGGAA
ACTTCTGTGG AAATGATAAC TGAGGCTACT GTAAACAATC CCGAATTGGT AGCGCAACAA
TCTGTTTCTT TTCTGCAAGT ACAACCCGAT GAGAAACTTG AGTTTAATAT ACTTTTTGAT
GTTTGCTTTT CAGTCAATAC ACTTTACTTT CTCAAAAGCC CTACTCGCTA TTATCGCAAT
ATTTGTCAGT TGCTCAAGCC TATGGGAAAG GTAGTGATTA CTCTTATTGA CAAGTCAGTA
GGTGAGAAAG CTCCTTTTGC ACAAGTGGGT TTTAAGTTTT ATACTGTTCC CGAAGTGCGA
AAAATACTCT CCCGCATAGG GCTTAAGAAT ATCAAAGAGT ATACTTTTGA AGAAACACTT
GTTTCTAAGA GTGGCAAGAA AATACGTCGT CCTTATTGCA TAATGATGGG AGAAAAATAA
 
Protein sequence
MNPPVTDMQL LGQLLRCPSG IYAKEVGEYT FFSNRTMIFN TIDCLSLLPN SNVLEIGFGN 
ASHLPYLFEK EPTIHYTGVE TSVEMITEAT VNNPELVAQQ SVSFLQVQPD EKLEFNILFD
VCFSVNTLYF LKSPTRYYRN ICQLLKPMGK VVITLIDKSV GEKAPFAQVG FKFYTVPEVR
KILSRIGLKN IKEYTFEETL VSKSGKKIRR PYCIMMGEK