Gene Coch_2082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2082 
Symbol 
ID8368543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2496069 
End bp2496974 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content41% 
IMG OID644984536 
Producthypothetical protein 
Protein accessionYP_003142187 
Protein GI256820908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.962185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTTT TAACAGGAAA ACCACTATCC GACACTATTT ACGATACCCT TTTTAAGGCG 
GAAAAGGAAC TTATTATCAT TTCGCCTTAT ATTCAGCTGG GAGATTACCT CAAAGACAAT
GTTTTTAAAC AGCTTTTAAA CAACACCAAA CTACATATAC TCATTGGGTT TGGCAAAAAT
ACCTCTAATG GAGAAGAAAA TTGTAAGCGT GAAGATATTG AGTACTTCTT GGGCTTCCCG
AATATCACAA TGGTGTATAT TCCACAGTTA CACGGACAAT ATTATGCCAA CGAAAAGCAA
TCGGTGATTA CCTCTATGAA CCTTTTGGAT TACTCGCTGG AAAACAAGGT AGAGTTTGGC
GTACTTGCCG AAAAAGCCCT TACCGACCTT GTAAACAAAA ACAACTTCTT CGAAACTTCC
AAAAATACCA TTATGAGTGT ACTCGACAGC GGTTACACTA TCTTTGCCAA ACGTCCTAAC
TACAACAAGA AGTTTTTAGG TCTGGCGAAA GACTACGCTG GCTCTACCGT GCATTTGGAT
TTGGTAGACG ATGTATTGTC TAACAGAGAG GTGAAGCCTA TCCGCTACTC CTCTTTTGTA
CCCGAAAACT ATGCAAATGC CGAGAACAGA CCACCCGCAG AGCGCGAGCC TACCTCTGAA
AGAGCTATAG AAACCGAAAC ACCTCAGGAA AATGCCGTAC AAGAAGAGAA AAAAGGACAT
TGTATCCGTT GTAATACCGC TATTCCTTTT GACCCTTCGA AGCCTTTGTA CAACAGCTGT
TATGAAGAGT GGGTGAAGTT CGGCAACCGT TTCTATGAAG AGAAGTACTG CCATTGCTGT
GGTGAGGAGA AGAAAGTAAC GGTAGCGACA CCTTTATGTT ATAATTGTTT TTCAAGACAA
TTGTAA
 
Protein sequence
MDFLTGKPLS DTIYDTLFKA EKELIIISPY IQLGDYLKDN VFKQLLNNTK LHILIGFGKN 
TSNGEENCKR EDIEYFLGFP NITMVYIPQL HGQYYANEKQ SVITSMNLLD YSLENKVEFG
VLAEKALTDL VNKNNFFETS KNTIMSVLDS GYTIFAKRPN YNKKFLGLAK DYAGSTVHLD
LVDDVLSNRE VKPIRYSSFV PENYANAENR PPAEREPTSE RAIETETPQE NAVQEEKKGH
CIRCNTAIPF DPSKPLYNSC YEEWVKFGNR FYEEKYCHCC GEEKKVTVAT PLCYNCFSRQ
L