| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2074 |
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| Symbol | |
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| ID | 8368535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2487533 |
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| End bp | 2488450 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644984528 |
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| Product | leucine-rich repeat-containing protein typical subtype |
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| Protein accession | YP_003142179 |
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| Protein GI | 256820900 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA TAAAACAACT TTTATGCGTG TTTGCCCTCG CAATTCCGTT TGTTGCAGGG
GCACAATCTA TGCAAATAAG AATTGCCACT ACCAGCGGAG ATGAACAAAG TTTCAGGAGC
GCTGAAGAGC TTATGAAGAC TAACTTTGCT AAGCTAAAAG AAGTTAGAAT TTATAGCAAT
TCAAATAATG AAGTGCAAGT AAGTGAGGCT TTATTGAGAA GGCTTTTCAG TGAAGCACAG
CAACTTGAAG TATTGGAAAT AAAGGAAGTG GGGATAGCTT CATTTCCTGA GCTAAGTGTT
GAAAATAAAA CACTAAAAGT ATTGGTATTA CGCCTCAATA ACCTCAGCAA ATTACCTGAG
AACATCGGCA GTCTTTCGGC TTTGCAAACT ATAGATATCT ATAACCCGAT TACTGAAGTG
CCTGCGTCAC TTATGAACTT AAAACAGTTA GAAAATTTGA AGTTTGAAGG AGCTGAATTT
ACAGATTTCC CAGAGCAAGT GTTTGCCTTA CCTAAGTTGA AATCACTTAT CATCAGTCAG
TTTGACACGA AGAACAAAAT AAAAGTACTT CCTGATAACT TCGACAAGTT GCCACTACTT
GAAGAACTAT CGTTGCGCAA TGCTGCGCTT AGCGAAGTGC CTGCCTCAGT AGGACGTTTG
CCAAAATTAG AAAACGTATA CTTCAATGCG AACAACCTCA CTAAATTACC ACAAGCATTG
GCTGAAAATC CACGATTAAC TTACGTGAAT ATCAACGACA ATCCGCTTGA TTTCAAACAG
TTTATAAAAT CGATAGAGAA AATACAGTGG AAGGGTGTTT TGTACATCAA CAACCGTAAT
TTCACTACTC AGCAATACGA AGAAGTAGAA AAACGCTTGC CCAGAATAAG CGTATTCTAC
ACTCAGAGAG AAGAATAA
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| Protein sequence | MKKIKQLLCV FALAIPFVAG AQSMQIRIAT TSGDEQSFRS AEELMKTNFA KLKEVRIYSN
SNNEVQVSEA LLRRLFSEAQ QLEVLEIKEV GIASFPELSV ENKTLKVLVL RLNNLSKLPE
NIGSLSALQT IDIYNPITEV PASLMNLKQL ENLKFEGAEF TDFPEQVFAL PKLKSLIISQ
FDTKNKIKVL PDNFDKLPLL EELSLRNAAL SEVPASVGRL PKLENVYFNA NNLTKLPQAL
AENPRLTYVN INDNPLDFKQ FIKSIEKIQW KGVLYINNRN FTTQQYEEVE KRLPRISVFY
TQREE
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