| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2070 |
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| Symbol | |
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| ID | 8368531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2482088 |
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| End bp | 2484457 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644984524 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_003142175 |
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| Protein GI | 256820896 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.535098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACAT TTTTAAAGGA ATTAGAAAGT CTAAATGCCC CTCAACGTGC TGCCGTGCTT
CAAAAAGATG GACCTATCAT CGTGATAGCA GGAGCAGGCT CTGGTAAAAC TCGCGTGCTT
ACTTATCGTA TAGCCAACTT GATGAGAGAA GGTGTAGATG CTTTCAATAT CCTTGCTCTT
ACCTTTACTA ATAAGGCTGC CAACGAAATG AAAAAGCGTA TTGCTAGTCT TGTAGGCAAC
AACGAAGCAA AGAACCTATG GATGGGTACA TTCCACTCCG TTTTTGCTAA AATCTTGCGC
ATCGAAGCCG ATAAATTGGG ATATCCTCAA AATTTTACTA TATATGACAC CCAAGACTCT
CAGCGCCTTA TTAATGGCAT CATTAAGGAG ATGGAGTTGG ACAAGGATAT CTATAAGTAT
AAACGAATAC AATCGCGTAT TTCTTCCTTT AAAAACAGTC TTATTACCGT GAGAGCCTAT
TTTAATAATC CTGAACTGAT GGAAGCTGAT GCAATGGCAA GACAACCACG TTTAGGAGAA
ATTTATCAAG AATATGTAGA CAGGTGTTTT AAAGCAGGAG CAATGGATTT TGACGATTTA
CTGCTGAAAA CAAATGAACT CCTCAATCTA TATCCTGATG TATTGGCAAA ATATCAAAAT
AGGTTTAGGT ATATTCTCGT AGATGAGTAT CAAGATACCA ATCACTCTCA ATATCTTATC
GTGAAGGCTT TGGCTGACCG TTTTCATAAC ATTTGTGTAG TAGGAGATGA TGCGCAAAGT
ATTTATGCTT TTAGGGGAGC AAACATCAAT AATATTCTCA ATTTCAAAAA TGATTATCCA
GAGGCAAAAG AATATAAGTT AGAGCAAAAT TATCGTTCTA CAAAAAACAT TGTGGAAGCA
GCTAATAGCG TGATAGAACA CAATAAAATA CGATTGGAAA AGGTAGTTTT CACCGAAAAT
GAATTAGGTG AACCTATTAA AGTGCATAGA AGCCCTACTG ATGCTGATGA AGGTCGTTTT
GTAGCGAGCT CTATCTTTGA AAACAAGATG CAACACCAGC TTCCTAATGG TAATTTTGCG
GTGCTTTATC GTACTAATTC ACAATCGCGT GCTATTGAAG ATGCTCTTAG AAAACGTGAC
ATTCCATACC GCATCTATGG CGGATTGTCA TTCTACCAAC GCAAGGAAAT CAAAGATATG
CTTGCTTATT TAAGACTTAT CATCAATCCA AATGATGAGG AAGCTTTGGT GCGCATTATC
AATTTTCCTG CACGAGGCAT TGGAGAAACT ACAATGGAAA AGCTTACTTT GGCAGCAAAT
CATTATAAGA AGTCTATCTT CGAGATAATG TATAACATCA ATAAACTTCC AGAATTGCAC
ATCAACACTA CTACAAAGCA GAAACTTACT GATTTTGTGG TAATGATTCT TAACTTTCAA
GCTCTCAATC AAAAAGCAAA TGCTTTTGAA GTTGCCGAAC AAGTCGCAAA GAAAACAGGG
CTTTTGCAAG AGTTTAAAAA AGATGGTACT CCCGAGGGTA TAGCCAAAAT GGAAAACATC
GAAGAGATGC TTAATGGTAT GAAAGATTTT GTAGAAGGAC AAGAAGATGT AGCAGATAGC
AGGGCAAGTC TTTCAGAATA TTTAGAAGAT GTTGCGTTGG CTACTGATAT GGATAAAGAG
ATAGGTGATG ATGACCGTGT AGCTTTGATG ACTATTCACT TAGCCAAAGG ATTGGAGTTT
CCGTATGTAT ACGTGGTAGG AATGGAAGAA GATTTGTTTC CTTCGGCAAT GAGCATACAA
TCGCGTAATG ATTTGGAAGA AGAAAGAAGG TTATTTTATG TAGCACTCAC CCGTGCTGAG
AAACAAGCCT ATTTAACTTA TGCAGAAAAC CGTTATCGTT GGGGAAAACT TTCTGATGCC
GAGCCAAGTA GATTTATCGA AGAAATAGAT GAACGCTATT TGCAGTATCT TACACCTTCT
ATTTCTAATC CTAATTATCG TTATAAACCA CTTGTTGATA GAGATATTTT TGGTGAAGTA
GATAAAAGTA AACTACGTTT GCAGAAACCT ATAAGTGGAA TACCTCCTCA TAAAAATGCC
CCAATAGGAG AAGAACAACA AAAACTCAGG AAGTTAAAAC CTGTAAATGC TTTGTATAAT
TCTAATAGTA ATAATAAAAA TACTTATAAC GGACTGGATA TAGGAACAGT AGTTTATCAC
GAACGTTTTG GACGTGGTAA AGTAATTTCA TTGGAGGGAA CAGGAAATGA TAAAAAGGCG
CAAATAAATT TCGAGACAGG AGGCTTAAAA AATATATTAT TACGCTTTGC TAAACTAACT
ATTATTGATA GTTTGAACGA AGATTTATAA
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| Protein sequence | MDTFLKELES LNAPQRAAVL QKDGPIIVIA GAGSGKTRVL TYRIANLMRE GVDAFNILAL
TFTNKAANEM KKRIASLVGN NEAKNLWMGT FHSVFAKILR IEADKLGYPQ NFTIYDTQDS
QRLINGIIKE MELDKDIYKY KRIQSRISSF KNSLITVRAY FNNPELMEAD AMARQPRLGE
IYQEYVDRCF KAGAMDFDDL LLKTNELLNL YPDVLAKYQN RFRYILVDEY QDTNHSQYLI
VKALADRFHN ICVVGDDAQS IYAFRGANIN NILNFKNDYP EAKEYKLEQN YRSTKNIVEA
ANSVIEHNKI RLEKVVFTEN ELGEPIKVHR SPTDADEGRF VASSIFENKM QHQLPNGNFA
VLYRTNSQSR AIEDALRKRD IPYRIYGGLS FYQRKEIKDM LAYLRLIINP NDEEALVRII
NFPARGIGET TMEKLTLAAN HYKKSIFEIM YNINKLPELH INTTTKQKLT DFVVMILNFQ
ALNQKANAFE VAEQVAKKTG LLQEFKKDGT PEGIAKMENI EEMLNGMKDF VEGQEDVADS
RASLSEYLED VALATDMDKE IGDDDRVALM TIHLAKGLEF PYVYVVGMEE DLFPSAMSIQ
SRNDLEEERR LFYVALTRAE KQAYLTYAEN RYRWGKLSDA EPSRFIEEID ERYLQYLTPS
ISNPNYRYKP LVDRDIFGEV DKSKLRLQKP ISGIPPHKNA PIGEEQQKLR KLKPVNALYN
SNSNNKNTYN GLDIGTVVYH ERFGRGKVIS LEGTGNDKKA QINFETGGLK NILLRFAKLT
IIDSLNEDL
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