| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2062 |
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| Symbol | |
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| ID | 8368523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2470360 |
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| End bp | 2473692 |
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| Gene Length | 3333 bp |
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| Protein Length | 1110 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644984516 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003142167 |
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| Protein GI | 256820888 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000641911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAAA AGTATTTATT TAATGTATTC TTTTTGTTGT TCTTCACAAT AGGTTGGGCA
CAAGAGATAA TGGTGAAAGG GACGGTTTCT TCTGATGAAA TGCCGTTGCC AGGTGCTGCT
GTAGTTGTGA AAGGTACCAC ACACGGTACC CAGACCGACT TTGAAGGGAA CTATACCCTC
ACTGCAAAGG AGGGTGATAT TCTTGTATTT AGCTTTGTAG GGTATACTAC CCAAGAGAGA
AGAGTAACAG GTAGTCGCCC TATTAATGTG TCGTTAAAGG AAGAAGCGAA TGTATTGGAA
GAAGTAGTGC TTACTGCTTA TGGAGGTACA CAAAAGAAAG CAAAAGTAAC GAGTTCTATT
GCTTCAGTGA AAACAGAAGT ATTATCAACC GGTTCTTTTT CTAACCCTGC TCAAGCCCTT
TCAGGAGCAG TGGCAGGACT CAGGGTAGCA CAGACTTCAG GAAGTCCAGG AGCAGCTCCT
ACCTTAGTAC TTCGTGGAGG TACTAATCTT GATGGTTCAG GCTCACCCCT TGTTATCATA
GATGGACAAA TCAGAGGGGG ATTGAATGAC ATCAACCCCG ATGATATAGA ATCAATGGAT
ATATTAAAAG ATGCTGGTGC TACTGCTATT TATGGAGCAA GAGCTAGCAA TGGGGTAGTA
TTGGTAACTA CTAAAAAAGG TAGATTAGGT GTTTCGTCAC TGAATGTAAA ATTGAAGCAC
GGATTTGCTT ATATGAATAA CCAAGTGGAG TTTCTTAATG CACGTGATTA TCTTTATTGG
CAACGTACAG CGGTACGTAA TAGTGCCCGT GTATGGCAAA ATGCTTCAGG TGATTGGAAA
GGATTTACTA ACGAAGCGAG TTTAAGTGGT GCGCAACCTT ACGGTACTGG TAATATACAC
TTCAAAAGTA TGACCGATGA TACGGTATTA AATCCTAATG AAAGTGCTAA TTCATATTGG
TCTACTATGT TCTCAGAAAG CCTTTCTCCT TCTCAAAAAC AAAAACTTCT TTCAGAAGGA
TGGCAAACGA TGACTGACCC TATTACGGGT AAAGAACTTA TTTTTTATGA TTTTGATTTC
AAAAAGGCAG CTTTCCGTCC TTTTGCTCTT ACAAGAGACT ATTCGTTATC AATGACAGGA
GGTAATGACA AAGGAAAATA TTATGCTGGT TTGGGCTATT ATAACCAAGA GGGTTTGCCT
ATTAAGAGTT GGTATAAGCG ACTTACTGGT ACTTTGAATG CTGAGTATAA GTTAAAACCT
TGGCTTACTT CCACCAGCAA CTTTTCAATA GCCTATGCTA CTTGGTATAA AAATGTGAAT
ACTTCTGCAG ATGATGCCTA TTTTGGACGT ATGCTTTCAG CTCCTCCCAC TCAAAAAGAA
AAAGTAAATG GACAGATAGT AATGGGACGT GGTGGTGCTG ACGGTAATCC ACGTTTTTAT
GAAAATATAT TTCTTCGTGA TAATAATACC AATAAAATTA ATTTCGGACA AAGCCTCAGG
GCTGATTTGT ATAAAGGGCT TTCATTAACA GTGAGTGGAC AAGTGATGTT TGATGAAGAA
TATTATGAAA GCTTTAATAA AGACCACCAA ACCTCACCAG GTAAAGCTGC TAATAACTGG
AGTAGAACTA GAAGTACTTC AGCCAGCTTT GGAAGAACTA TACGTCAAAC TTATAATAGT
ATCTTAAACT ACAAGTTTGA TATAAAATCT CATCACTTTG ATGCTATGGC AGGTTATGAG
TATTACGACA GCTATACACG TGGGCTTAGT GCTTCAGGAT CAGAAGCACC TACCGATGAA
TTCGAAGACT TAGGTTTGAC TTCTAATAAA GAAGGTAAAC GTGGAATAGA TTCATATCAT
TATGGCAATA GAATCAAATC ATATTTTGGA CGTTTAAACT ATGATTATGC TGATAAATAT
TTGTTTTCAT TTACTATTCG CCGTGATGGA TATTCTCGAT TGATTAATAA CCGTTGGGGT
AACTTCCCAG CAGCCTCTCT GGGTTGGATT ATTACTCGTG AAGAGTTTAT TCCTGACAAT
ATAAAACGAG TACTTTCGTT TGCAAAACTC AGAACCAGTT TTGGTTTGAA TGGTAATGTG
CCAGATAAAT TTATAGGTGA TTATACCTTA CAAGGTTCTT ATGGCACTAA TAAGTACAAT
GGGGCAGTAG GTTATGTCAT AGGTACTTTT CCTAATAAAG GACTTCGTTG GGAGAAAACG
CGTACCTTTG AAGTTGGATT AGATTTAGGT TTTATCCAAA ACCGTATCAA TGCTAATTTT
ACATTGTACG ATCGTTTGAC AAGTGATAAG ATACAGTCAA TGACACTTCC ACACTCATCA
GGAGCTTCTG CTATCAATAC TAATAATGGG TCTTTCAGAA ACAGAGGAGT AGAGATAGAA
ACCAACTTCC GGATTATTGA TAAGAATGAT TTGCATTGGA GTTTAGCGAT AAATGCTGCT
TATAACAAAA ATACGGTAGT AAAACTACCT CATAACGGTT ACCCTAATAA TAGGCAAGAT
GCTATTGAGG TCTATAATCC TACCACAGGT GAAAAAGAAT GGGTAGGAGG TTATCAAGAA
GGACAAGAGC CTGGTGATAT GTATGCTCAC GAAGCGTTAG GTATATACCA AAATGAAGAA
CAAGTAAAAC GCTTGGCTGA TAATTTGGTT GATGAAACCG GATCTAAAAA ACTATACGGA
CCTGCCGCTT GGGCAAGACT AAGCGATGCT GAAAAAGAAA AAGGACTTCC TATCCAGCCT
GGAGATGTAA TTTGGAGAGA TGTGAATGGA GATGGTAAAA TTGATAATTA TGATTTAGTG
AAAGCTGGTA ATATTTACCC TAAATGGACA GGAGGTATCA ATACTACCTT AAGTTATAAA
AATATCCGAC TCTCTGCCCG TATGGACTAT GCGCTCAACT TTAAACAGCG TATCTCAATA
GGTAACTCAT TACCTTGGTA CTTAGGTAAT ATGCAAGGTA CTTTTAACAC TGTTAAACAG
GTAAATGATA CTTGGACACC TGATAACCCT ACTGCTAAAT ATCCTAAATA TTATTGGGCT
GACCAGCTTG GTAAACGTAA TTACTACCGC AGTTCAACAA TGTTTATTTA TGAAGGAAGT
TACTTAGCCT TCCGTGAGAT AGCTCTTAGC TATAATTTCC AAAAAGATAT AGTGAGTAAA
ATGGGACTTG ATAATTTAGA ACTATCTTTG ATAGGTCAAA ACTTAGGTTA CCTTACTAAA
GCCGAAACTT ACTCTCCTGA GGCTTTAGGG CAATCAAACT CAGGCTATCC ATTGCCAAGG
ACTATTATCT TAGGATTGAA TCTAACCTTT TAA
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| Protein sequence | MKQKYLFNVF FLLFFTIGWA QEIMVKGTVS SDEMPLPGAA VVVKGTTHGT QTDFEGNYTL
TAKEGDILVF SFVGYTTQER RVTGSRPINV SLKEEANVLE EVVLTAYGGT QKKAKVTSSI
ASVKTEVLST GSFSNPAQAL SGAVAGLRVA QTSGSPGAAP TLVLRGGTNL DGSGSPLVII
DGQIRGGLND INPDDIESMD ILKDAGATAI YGARASNGVV LVTTKKGRLG VSSLNVKLKH
GFAYMNNQVE FLNARDYLYW QRTAVRNSAR VWQNASGDWK GFTNEASLSG AQPYGTGNIH
FKSMTDDTVL NPNESANSYW STMFSESLSP SQKQKLLSEG WQTMTDPITG KELIFYDFDF
KKAAFRPFAL TRDYSLSMTG GNDKGKYYAG LGYYNQEGLP IKSWYKRLTG TLNAEYKLKP
WLTSTSNFSI AYATWYKNVN TSADDAYFGR MLSAPPTQKE KVNGQIVMGR GGADGNPRFY
ENIFLRDNNT NKINFGQSLR ADLYKGLSLT VSGQVMFDEE YYESFNKDHQ TSPGKAANNW
SRTRSTSASF GRTIRQTYNS ILNYKFDIKS HHFDAMAGYE YYDSYTRGLS ASGSEAPTDE
FEDLGLTSNK EGKRGIDSYH YGNRIKSYFG RLNYDYADKY LFSFTIRRDG YSRLINNRWG
NFPAASLGWI ITREEFIPDN IKRVLSFAKL RTSFGLNGNV PDKFIGDYTL QGSYGTNKYN
GAVGYVIGTF PNKGLRWEKT RTFEVGLDLG FIQNRINANF TLYDRLTSDK IQSMTLPHSS
GASAINTNNG SFRNRGVEIE TNFRIIDKND LHWSLAINAA YNKNTVVKLP HNGYPNNRQD
AIEVYNPTTG EKEWVGGYQE GQEPGDMYAH EALGIYQNEE QVKRLADNLV DETGSKKLYG
PAAWARLSDA EKEKGLPIQP GDVIWRDVNG DGKIDNYDLV KAGNIYPKWT GGINTTLSYK
NIRLSARMDY ALNFKQRISI GNSLPWYLGN MQGTFNTVKQ VNDTWTPDNP TAKYPKYYWA
DQLGKRNYYR SSTMFIYEGS YLAFREIALS YNFQKDIVSK MGLDNLELSL IGQNLGYLTK
AETYSPEALG QSNSGYPLPR TIILGLNLTF
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