| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2057 |
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| Symbol | |
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| ID | 8368518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2463729 |
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| End bp | 2464520 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644984511 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_003142162 |
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| Protein GI | 256820883 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAACA AAGAAGATAA TTTCTTTCTC TTAGCGGGAC CTTGTGCCAT AGAAGGAGAG
GATATGGCGA TGAAAATTGC TGAACATATA GTGAATATCA CTCATAAACT GAATATATCC
TACATTTTTA AAGGGAGTTT TAAGAAAGCC AATAGGAGTC GCGTAGATTC GTTTACGGGC
ATAGGCGATG AAAAGGCACT AAAAATACTC CAAAAAGTAG GGCAAACCTT TAATGTTCCT
ACTGTTACTG ATATTCATCA GGTGAGCGAT GCGGCGATGG CTGCCGAATA TGTAGATGTA
CTGCAAATAC CAGCTTTCTT GGTGCGCCAG ACTGATTTGG TGGTGGCAGC AGCCGAAACG
GGCAAGGTAG TGAACCTGAA AAAAGGTCAG TTTATGAGTC CTGAGAGTAT GCAATTTGCC
GTGCAAAAAG TATTTGATAG TGGCAATGAA AAAGCGTTGA TAACTGACCG TGGCACGATG
TTCGGTTATC AAGACTTGAT AGTAGATTTT CGCGGAATTC CGACGATGCG CAAGTTTGCT
CCCGTAGTAA TGGACGTTAC GCACTCGCTA CAACAACCTA ACCAAAGTAG TGGGGTAACA
GGCGGTCGCC CAGATATGAT TGAAACCATT GCCCGCGCTG CTATTGTGAA CAATGCTGAT
GGACTTTTTA TCGAAACCCA TTTTGACCCT GCTAATGCCA AAAGTGATGG GGCAAATATG
CTACATCTCG ACCTCCTTGA AGGTCTTTTA ACGCGTTTGG TTGCCATTCG CAAAACAATT
AACGAATTTT AA
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| Protein sequence | MINKEDNFFL LAGPCAIEGE DMAMKIAEHI VNITHKLNIS YIFKGSFKKA NRSRVDSFTG
IGDEKALKIL QKVGQTFNVP TVTDIHQVSD AAMAAEYVDV LQIPAFLVRQ TDLVVAAAET
GKVVNLKKGQ FMSPESMQFA VQKVFDSGNE KALITDRGTM FGYQDLIVDF RGIPTMRKFA
PVVMDVTHSL QQPNQSSGVT GGRPDMIETI ARAAIVNNAD GLFIETHFDP ANAKSDGANM
LHLDLLEGLL TRLVAIRKTI NEF
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