| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2052 |
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| Symbol | |
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| ID | 8368513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2456657 |
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| End bp | 2458879 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644984506 |
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| Product | Patatin |
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| Protein accession | YP_003142157 |
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| Protein GI | 256820878 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.185363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATAT TCTTAGCAAC CATATTTCTG ATACTTAGTA GTCCTCTTCT GCGTGCGCAA
GATACTACCC ACAAAAAGGA TTTAAAAGTG GGATTGGTAC TCAGCGGTGG AGGTGCGAAA
GGGTTAGCAC ATATAGGGGT ACTAAAAGTG TTGGAAGAAG CAGGGGTGCG CATCGATTAC
ATCGGGGGTA CGAGTATGGG GGCTATGGTA GGAGCTTTGT ATGCGGCGGG TTATTCAGCT
AATGAGTTGG ACTCTATCTT CCGTCAGTTA GACTTTGATA AACTCTTGCA AGACAAGACT
TCACGCCGTG CTAAATCATT ACACGAGCGC TATATATACG ACCGTTACGC AGTAGCATTG
CCTTTCAATA ACTTCAAAGT AGGGTTGCCT CGTGCGGTAT CAAAAGGACA AAACATCTAT
AACGAGTTTG TGAAACTACT TTATCCGGTG AATGAAATCT ATGATTTTTC GCAGTTACCC
ATTCCTTTCT TGTGTGTAGC AACGGATATA GAAACAGGTA AAGGCGTAGT ACTTGAAAAC
GGTTTCTTGC CTCAAGCAAT ACAAGCAAGC GGTTCGTTTC CTTCGCTATT CGATTTGGTA
GAAATAGATG GTAAATGGCT TACCGATGGC GGTATTGCCG ATAATTATCC GGTAGACGAA
GTTAAGAAAA AAGGAATGGA TATTATCATA GGGGTAGATG TACAGAGTCC GCTAGCAAAA
CGAGAGGAGA TTAACTCTTT TTTGAGTATT TTTTCGCAGA TTACTACCTT CCCAATGATA
GATAATATGC CAAAAAAAAT AAAAGAGACC GATGTGTACA TCAAACCTAA TATAGAGGGA
TTCAACGTTA TTTCGTTTGA TAAAGGAGAG ATAATCATCA ACAATGGCAA AATAGCAGCG
GAACATTTTC TACCAAGATT GCGTGAGATT GCAGCTCAAC AAAAACATAC AGAGGAAAGA
GAACGAATAC AAAAGATAGA TTCCTTTTAC TTAAAAGATG TCCATTTTCA TAACAACGAG
CACTTTTCAC GTAGTTATTT GCGCGGTAAA CTACACTTGA AATATCTAAA CCGTAAGATT
TCGTTCGAGC AACTGAACGA CGGAATCGAC AACTTGATGG CTACTAACAA TTTCCATTCT
ATCAATCACC AGATTAGGCA CACATTTGAA GGGGAACATA TAGACTTTTA TTTAAGAGAG
AATCCGCAAC GCACCTTTTT GAAATTTGGG ATACATTATG ACAATCTGCT AAAAACAGGG
TTCTTGATGA ACTATACTCG GAACTATTTC TTACAAAGCA GTGATTTTCT TTCACTCGAC
CTTATTGTGG GAGATAACAT ACGCTATCAG TTTGATTATT TTGTGGATAA GGGATTTTAC
ATCAGTTATG GATTGCGGTC TAAGTTTGTG CAATTCGACC GGAAGCTGAA CACAAAACGC
TTGTCTAACT ACCGAATAGA GCAGTCGGAA CTCAACCGAA TGGACGTAGA GGCTTACGAC
TGGGTAAATC AGCTGTATTT GCAAACACTT TCGGGTAATG GTTTTGTATT TGGCTTAGGA
GTAGAGCACC GCAAAATACA GTTTGATACT GAGCAAGTGC ATTCAATAAG TTCAGCAACT
TCGTATTCGG AAAAGAGTCA TATAGGCAGT CTGTATTCTT ATCTTAAATA CGACAGCTTT
AACAATAGCT TTTTCCCCAG TAGAGGGGTG TACTTCAATA CACAGTTCAA TTTTTATGCA
CTTGCCTCTA ACTACTCAGA TTTTAACAAA TTTACAACGG GTAAAACAGA GTTATCATTT
GCTTTTCCTA TCTTGCCAAG ATTGAGCGCA CGAGTAGGAT TAGAAGGCGG TGTTACCATA
GGAGGCTCTA ATGTATACTC ATTAGACTTC TTTTTAGGAG GGTATAACAA GAATGTATTT
ACGAACTATT CACCTTTTTA CGGCTATGAT TTTTTGAGTA TTGGTGCTAA AAACTACTTA
AAATCAGAAT TGGTAATAGA TATCCAACCC TTTAAGAAAC AACACTTGCT ATTATTAGCG
AATATTGCTA AAGCAGACAA TAATCTTTTT GAGAGCTTTG AGTGGAAGAA ATACCCAGAC
TATTCGGGGT ATGGGATAGG ATATAGCATT GAGAGCTTTT TAGGTCCTAT AGAACTGAAG
TGCACTTACT CACCTGAAAT AAGACAAGCG ATATGGCTGT TTAATATAGG GTACTGGTTC
TGA
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| Protein sequence | MRIFLATIFL ILSSPLLRAQ DTTHKKDLKV GLVLSGGGAK GLAHIGVLKV LEEAGVRIDY
IGGTSMGAMV GALYAAGYSA NELDSIFRQL DFDKLLQDKT SRRAKSLHER YIYDRYAVAL
PFNNFKVGLP RAVSKGQNIY NEFVKLLYPV NEIYDFSQLP IPFLCVATDI ETGKGVVLEN
GFLPQAIQAS GSFPSLFDLV EIDGKWLTDG GIADNYPVDE VKKKGMDIII GVDVQSPLAK
REEINSFLSI FSQITTFPMI DNMPKKIKET DVYIKPNIEG FNVISFDKGE IIINNGKIAA
EHFLPRLREI AAQQKHTEER ERIQKIDSFY LKDVHFHNNE HFSRSYLRGK LHLKYLNRKI
SFEQLNDGID NLMATNNFHS INHQIRHTFE GEHIDFYLRE NPQRTFLKFG IHYDNLLKTG
FLMNYTRNYF LQSSDFLSLD LIVGDNIRYQ FDYFVDKGFY ISYGLRSKFV QFDRKLNTKR
LSNYRIEQSE LNRMDVEAYD WVNQLYLQTL SGNGFVFGLG VEHRKIQFDT EQVHSISSAT
SYSEKSHIGS LYSYLKYDSF NNSFFPSRGV YFNTQFNFYA LASNYSDFNK FTTGKTELSF
AFPILPRLSA RVGLEGGVTI GGSNVYSLDF FLGGYNKNVF TNYSPFYGYD FLSIGAKNYL
KSELVIDIQP FKKQHLLLLA NIAKADNNLF ESFEWKKYPD YSGYGIGYSI ESFLGPIELK
CTYSPEIRQA IWLFNIGYWF
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