| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2050 |
|---|
| Symbol | |
|---|
| ID | 8368511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 2454769 |
|---|
| End bp | 2455308 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644984504 |
|---|
| Product | Nicotinamidase |
|---|
| Protein accession | YP_003142155 |
|---|
| Protein GI | 256820876 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0750856 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAC TTGTAATTAT AGATGTTCAA AACGATTTTA TGCCTACCGG TACATTACCT
GTACCCCAAG GCGACCAAAT AATTCCCTTT ATCAATGCCG AAATGACACA AGGGTATGAC
CTTATTGTTG CAACACAAGA TTGGCACCCT GCTACTCATA AAAGTTTTGC AAGTCAGCAC
GCAGGTAAAA AGCCTTTTGA AGTAATACAG CTCGGAGGTA TCGACCAAAT ACTGTGGCCA
GACCACTGTG TGCAAGGTAC TTTCGGAGCT GAACTGCATA AAGATTTAGA TATTCGTCCC
ATTGCAGCCA TCTTTCGCAA AGGAATGAAT CCCGAAGTAG ATAGCTACAG TGCTTTTTTT
GATAATAATA AACAGAACAA CACAGGATTA CACGGCTTTT TGCAAGACAA AGGCATTACA
GAACTCGTAT TTTGTGGCTT AGCAGGTGAT TTTTGTGTAG CTTATAGTGC CAATGATGCC
AAAGCCTTAG GCTATAAGGT AAGTTTGTTC GACAAAGGTA TAAGGTCAAT CAATTGCTAA
|
|---|
| Protein sequence | MKALVIIDVQ NDFMPTGTLP VPQGDQIIPF INAEMTQGYD LIVATQDWHP ATHKSFASQH
AGKKPFEVIQ LGGIDQILWP DHCVQGTFGA ELHKDLDIRP IAAIFRKGMN PEVDSYSAFF
DNNKQNNTGL HGFLQDKGIT ELVFCGLAGD FCVAYSANDA KALGYKVSLF DKGIRSINC
|
|---|
| |