Gene Coch_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2042 
Symbol 
ID8368503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2447683 
End bp2448198 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content35% 
IMG OID644984496 
Productprotein of unknown function DUF192 
Protein accessionYP_003142147 
Protein GI256820868 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.737978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTTT TTAGAAAACA CTTTGTAACT GTAGCATTAG TATTGGTAGC CTTAGCAGCT 
ATTACCCTTA TTTTACCTCG TTTCTTCTCT AATGAGAGTA ATAGAGTGCA AGAAATAGAA
ATCGCTCCTC AGGATATTGA TTTTACTCGA GACGGTGAAC TCTCTATCTT TAAAAACGAC
TCTCTTATCC AAACTATTGA AGTTGAATTT GCTAAAAATG ATGAGGAACG TGCCTTAGGG
CTAATGTACC GCTCTTCAAT GGACGAACAT CAAGGAATGT GGTTTATTTT TCCAGAAGAA
GCTCCTCGTT CTTTCTATAT GAGAAATACT GAAATACCTT TGGATATCAT CTATTTAGAT
AAAGATAAAA AGGTGGTAAG TATAGCTAAA AATGCTCGCC CTTACGACGA AACTTCTTTA
CCCTCAGAGA AACCCGCTAT GTATGTATTA GAAATCAATG GAGGTCTATC TGATAAATGG
GGAATTGAAA AAGGCGATAG AATGGAAGTA AAATAA
 
Protein sequence
MQFFRKHFVT VALVLVALAA ITLILPRFFS NESNRVQEIE IAPQDIDFTR DGELSIFKND 
SLIQTIEVEF AKNDEERALG LMYRSSMDEH QGMWFIFPEE APRSFYMRNT EIPLDIIYLD
KDKKVVSIAK NARPYDETSL PSEKPAMYVL EINGGLSDKW GIEKGDRMEV K