| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2035 |
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| Symbol | |
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| ID | 8368496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2436913 |
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| End bp | 2439366 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644984489 |
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| Product | transcriptional regulator, TrmB |
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| Protein accession | YP_003142140 |
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| Protein GI | 256820861 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTTCG TAGATGTAAT CTTGCCGCTT CCACTTTCTA AACTTTTTAC CTATCGTATT
AATGAAGACG AAGCACATTT CCTACAAATG GGAATGCGCG TGGCTGTTCC ATTCGGTAAA
TCGAAAGTAT ACACGGCTAT AGTACATCAT ATACATACGG TTGAGCCTTC TTATGACACT
AAAGACATTG AATATATCTT AGATGAAACG CCTATTATTA CTCCCCAGCA AATAGAACAT
TGGCAATGGA TAGCCGATTT CTATATGTGC ACTTTAGGGG AAGTACTAAA ATCAGCCTTG
CCATCGGCTT TTTTATTAGA AAGTGAAACA ATAATTGAAA TTGCAGAAAA AGAATTAAAT
TCAACACTCT TTACCGATGA CGAGTGGCAG GTATACGAAG CCTTACATTA CAAAACAGCC
CTCAAAGGTA GTGAGGTGAG CAAGATAATC CCCAAAAACA AGGCACTGAA AGTGATGAAG
AGCTTGGTAG AGAAAGGAGC TGCTCGCATT TCCGAAAGAA TATTTGAGAA ATATGTACCA
AAACTCATCA AATACATTCG TTTATCTTCT GAATATCAAA CCGAAGAAGG CTTGCAAAAA
GCCTTAGAAC TTTTGAAGCG GTCGGAAAAG CAAAAGAAGC TGATAATGGC TTATTTTAAT
TATATCAACA GAGAAGTACT GCCTTTAAAA GCAGAAAAAT TATTAGAAGA AGCCAGTGTA
TCGACAACAG TACTAAAATC AGTAATAGAA AAAGGCATTT TTGAAGAATA TTACTTACAG
AAAGACCGTG TTAGCTTTGC TGATAGTGAT GTTTCGACAA AAAAGGTACT CAATGAGGTA
CAAGAAGAAG CTCTCCATCA AATTCAGAAA CAGTTTCAGA CTAAAAACAC AGTTCTTTTA
CAAGGGGTTA CCGCCTCTGG GAAGACTGAA ATTTACATTG AACTTATCAA CCAATATTTA
AAGGCAGGAA AACAAGTACT CTATCTTCTT CCTGAAATCG GCTTGACGGT TCATCTTATC
AACCGATTCA AGAATCACTT TGGCAAGAGC CTCTCAGTAT ATCATTCTAA ATATAGTACA
AACGAACGGA TAGAAGTTTG GAATAATGTA CTAAATAATA GTCCCAAAGC GCAATTGATT
GTAGGTGTTC GCTCATCAGT TTACTTGCCT TTCAGGCAAT TAGGGCTTGT AATCATTGAT
GAGGAGCACG ATAATTCTTA CCGACAGTTT GAGCCAGCCC CTCGAATGCA AGCACGGGAT
ACTGCTATTA TGTTGGCAAA CATTTTCAAA GCTAAAACTT TGCTGGGTTC GGCAACGCCC
TCGTTGGAGA GTATGCACAA CGTGAAGACT GAAAAGTACG GATTTGTATA CTTATCAAAA
CGCTACGCAG ATTTCCTTCC TCCTATTATC GAGCTTATCG ATATTAAGGA TAAGCACCAT
CGCAAACGTA TGAACGGGCA TTTTTCCGAC GTTCTGATAA AGGAAATTAC GAATACTTTA
TCGCAAGGGA GACAGGTGCT TCTCTTTCAA AACAGAAGAG GTTATGCTCC TATCGTGCAG
TGTATGCAAT GTGGCACGGT GCCCCAATGT CCGCATTGCG ATGTAAGTCT CACTTTTCAT
CAAAGCAGTA ATCAGTTGCG ATGCCATTAT TGCGGTTATG CAATTCCTAT GCCCAAAGCC
TGTATAGCTT GTGGAAGTGT TGATTTAAGA ACAAAAGGCT TCGGAACAGA GCAAATTAGT
AAAGAATTAG AAGTGCTTTT CCCGAACATA GCCATAGACA GAATGGATCA GGATACTACC
AATGGTAAAT ATGGATATGA AAAAATATTA TCGAAGTTCG AGCAACAAGA AACGCAAATA
TTAGTAGGTA CTCAAATGAT CACGAAGGGA TTAGATTTTG AAAACATAGG TCTAGTAGGC
GTAATGAATG CCGATGCTCT CATTCATTCT CCTGACTACC GAGCTTACGA AAGGAGTTTT
CAACTATTAT TGCAAGTATC AGGGCGTGCG GGAAGAAGTG CCCAACAAGG AAAAGTATTT
ATACAAACCT ATAACCCACA GTACCCCGTA ATTCAGCAAG TATTACAAAA TGATTTCAGA
GGAATGTATC AAAGTCAGAT AGAGGAACGC CAATCCTTTT TATATCCTCC TTTTGTACAA
ATGATAAAAA TAACTCTCAA ACACAGTAAT TTTAACCAAG TAAATGAAAG TGCTGAGTGG
TTTGCTAATA CACTTCGTGA AGTTTTTGCT TCTCAAAGAG GGATAGACGT CTTAGGTCCT
GAATTCCCTC CTATTTCGCG TATCAGAAAT GAATATCTGA AAGATGTCTT GGTGAAAGTA
CACCCCTCAG AAGTGTCTTT ACGTCACACT AAAGAGCATA TCAGGCGTAT TGAAACTAGT
TTTCAAGCTA TCAGCAACTT TCGTGCTATT CGGGTAAGTT ATTTGGTGGA ATAA
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| Protein sequence | MYFVDVILPL PLSKLFTYRI NEDEAHFLQM GMRVAVPFGK SKVYTAIVHH IHTVEPSYDT
KDIEYILDET PIITPQQIEH WQWIADFYMC TLGEVLKSAL PSAFLLESET IIEIAEKELN
STLFTDDEWQ VYEALHYKTA LKGSEVSKII PKNKALKVMK SLVEKGAARI SERIFEKYVP
KLIKYIRLSS EYQTEEGLQK ALELLKRSEK QKKLIMAYFN YINREVLPLK AEKLLEEASV
STTVLKSVIE KGIFEEYYLQ KDRVSFADSD VSTKKVLNEV QEEALHQIQK QFQTKNTVLL
QGVTASGKTE IYIELINQYL KAGKQVLYLL PEIGLTVHLI NRFKNHFGKS LSVYHSKYST
NERIEVWNNV LNNSPKAQLI VGVRSSVYLP FRQLGLVIID EEHDNSYRQF EPAPRMQARD
TAIMLANIFK AKTLLGSATP SLESMHNVKT EKYGFVYLSK RYADFLPPII ELIDIKDKHH
RKRMNGHFSD VLIKEITNTL SQGRQVLLFQ NRRGYAPIVQ CMQCGTVPQC PHCDVSLTFH
QSSNQLRCHY CGYAIPMPKA CIACGSVDLR TKGFGTEQIS KELEVLFPNI AIDRMDQDTT
NGKYGYEKIL SKFEQQETQI LVGTQMITKG LDFENIGLVG VMNADALIHS PDYRAYERSF
QLLLQVSGRA GRSAQQGKVF IQTYNPQYPV IQQVLQNDFR GMYQSQIEER QSFLYPPFVQ
MIKITLKHSN FNQVNESAEW FANTLREVFA SQRGIDVLGP EFPPISRIRN EYLKDVLVKV
HPSEVSLRHT KEHIRRIETS FQAISNFRAI RVSYLVE
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