Gene Coch_2033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2033 
Symbol 
ID8368494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp2435118 
End bp2435783 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content44% 
IMG OID644984487 
Producturacil-DNA glycosylase 
Protein accessionYP_003142138 
Protein GI256820859 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTGA ACATACACCC CAGCTGGAAG TCGGTATTAC AAGAAGAATT TAATAAGCCG 
TATTTCAGTC AGCTCACCGA TTTTGTAAAG AAAGAATATG CCGAAAATAT CTGTTATCCC 
AAAGGAAAGC AAATATTTTC GGCTTTCGAC CATTGTCCGC TGGACAGGGT GAAAGTAGTT 
ATCATCGGGC AAGACCCCTA TCACGGCGAA GGGCAGGCAA ACGGTTTGTG CTTTTCAGTA 
CACGATGGCA TTGCTCACCC ACCTTCACTT ATCAATATTT TTAGGGAAAT AGGGCAGGAT 
TTAGGCACCT CCTACCCTAT CAGTGGCAAT TTGGAGCGCT GGGCATCGCA AGGAGTTTTG 
CTGCTGAACG CCACTCTCAC CGTAAGAGCC AACGAAGCTG GTAGCCACCA AAATAAAGGG 
TGGGAAACTT TTACTGACGC TGTTATTAAA GCAGTTTCAG CACATTGTAA CAATATAGTG 
TTTATGTTGT GGGGTGGTTA TGCCAAAAAG AAAACAAGCC TTATCGACCC GACAAAACAT 
TGTATTCTTA CCTCAGGGCA CCCCTCTCCT TTGAGTGCAA ACAAAGGCTA TTGGTTTGGC 
AACAAGCATT TCAGCAAAGC TAATGCCTAT CTTACATCCG TAGGGAAGGA AGCCATAAAC 
TGGTAA
 
Protein sequence
MEVNIHPSWK SVLQEEFNKP YFSQLTDFVK KEYAENICYP KGKQIFSAFD HCPLDRVKVV 
IIGQDPYHGE GQANGLCFSV HDGIAHPPSL INIFREIGQD LGTSYPISGN LERWASQGVL 
LLNATLTVRA NEAGSHQNKG WETFTDAVIK AVSAHCNNIV FMLWGGYAKK KTSLIDPTKH 
CILTSGHPSP LSANKGYWFG NKHFSKANAY LTSVGKEAIN W