Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_2030 |
Symbol | |
ID | 8368491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2431144 |
End bp | 2431740 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644984484 |
Product | lipoprotein signal peptidase |
Protein accession | YP_003142135 |
Protein GI | 256820856 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAA AACACGCATT CCTTATTATT CTGTTGGTAC TTATCATCGA CCAATGGAGC AAAATATACA TCAAAACACA CTTTATCCTC AACGAAGCCG TAACCGTTTT CAGTTGGTTT CAAATCTATT TTGTAGAAAA CGAAGGTGCA GCTTGGGGTA CTAAAATCCC CGGCGAATAC GGCAAACTCA TTCTTACCCT CTTTCGCATT GTAGCGGTAA TAGGTATCGG TTATTGGCTG GTATCGGCAG TGAGAAAGCA ACAACCTAAG ATACTTATCA TTTGCATTTC TTTGATATTG GCAGGAGCAC TGGGCAATAT CATCGATTCG GTGTTTTACG GCATAATTTT CGACCATAGT TATGGTAACA TTGCTACCCT ATTTGCCGAA AATCCTTACG GAACCCTCTT GCACGGCAAA GTGGTGGATA TGTTCTACTT CCCTATTATC GATACCACGC TTCCCAGCTG GGTACCCATT TGGGGAGGCG AACGCTTTCG TTTCTTCGAG CCCGTGTTCA ATGTGGCTGA CTCTGCAATA TGTATAGCAG TGGGGCTGAT GATTTTATAT CACAAAAAGA TATTTCCTAA AAACTAA
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Protein sequence | MKLKHAFLII LLVLIIDQWS KIYIKTHFIL NEAVTVFSWF QIYFVENEGA AWGTKIPGEY GKLILTLFRI VAVIGIGYWL VSAVRKQQPK ILIICISLIL AGALGNIIDS VFYGIIFDHS YGNIATLFAE NPYGTLLHGK VVDMFYFPII DTTLPSWVPI WGGERFRFFE PVFNVADSAI CIAVGLMILY HKKIFPKN
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