| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2029 |
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| Symbol | |
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| ID | 8368490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2428549 |
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| End bp | 2431059 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644984483 |
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| Product | Tetratricopeptide domain protein |
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| Protein accession | YP_003142134 |
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| Protein GI | 256820855 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAG TTTTACTATA CAGTAGTTTT TTAGTTGTTT TTTTGCTATA TTTAGCTTGT
ACACCTAATG CTAATACCTA TTATAACCGT CAGATGCAGC CTATTGTTAC CAAGTATAAT
GTACTGTTCA ATGGGGAGGA AGCATATGCC AAAGGTCTTA ATGAACTACG CGAAAAATAT
CAAGATAATT TTAGTGAAAT TCTACCCGTA GAGCCTATTG GTATGACAGG AAAAGTGCAA
TTAGATGGTA CAGGTAATGC TGATTTTCAA CGTGCTGAAG AAAAAGCTAT TAAAACCATT
CAGAAACACT CTATGGTTTT TAAAGGAGTA CAACGCAACT ATAAAATTGA CGACGCTTAT
ATGTTACTCG GTCAAGCTCG TTATTACGAT GAGCGTTTCT TTCCTGCCTT AGAGGCTTTT
AATCACCTGC TTACGAACTA CGGAACGAGC GAGCGTATTC CTGAGGCAGC GGTTTGGGCA
CAAAAAGCTA ATCTCCGTTT AGGTAAAGAT AAAATTGCCA TAGAAAAACT CACTGAATTT
TTAAAAGAGA ATCCTAAATT ACGCAAAAAT GATAAAGCTG AAGCCTATGC TACCTTAGGA
CAGGCTTATA TTAACCAAGA ACAATATCCT GAGGCTGCCG ATGCGCTTTA CAATGCTGGT
AAATACACTC GTAATAAGGC TTTACGCGGT AGATATTACT TTATTGCAGC TCAGCTTTAT
GAAAAACAGC ATCAAAAAGA CTCCGCCGAA GTAGCTTTTG AAAAGGTTGT GAAGCAAAAC
TGGAAGATTC CGCGTAAGCT ATGGGTAGAA GCCCAAGCAG GAAAGGCTCG CAACAAAACA
TTTACCCCTG AAGAAAAGGC TAATTTTTTA GCTTACCTTA CCAAGCTTGA ACGCCGTTAT
GAGCACAAAA ACTATCTCGA TGTGCTTTAC TACACTCACG GCGAACTTTT AAAAGATGAT
GATAAGCGTT TGGCTACCGA TTTTTATCGT AGTTCTCTTT CCAACAATAA GAATAACAAT
CCGTTAAAAG CAAAAGCTCA TACACGTCTC TCTGAATTAT TTTTTGACCA AAAAGACTAC
ACAGGAGCTT ACCAGCATTT GGATAGTACT CTTACTTATA TCCCTGAACA TACCTTTGAA
CATCTTTTTA TTCGCAGAAA AAGAGATAAC TTGTCTAAGA TTGCTGAGTT AGAATACGTT
GTTAAGAAAA ATGATAGCGT TTTAAAAGTT ATGCGCTTGC CAGAGACAGA ACGTCGTGCG
TATTACCAAA AACATATCGA TTCTGTACAG AAAGCAATTG CTCTTCGCAC ACAAAAGCAA
CACAATAAAA AGGTTGCCAA CACAGGTATG GGGGTAACGA TGCCCGATGC TACTACTGAA
AAGGGTGGCA AGTTCTATTT CTACAATCCG ATGAGTGTAG CTTATGGGAA ACAACAGTTT
CAACAATATT GGGGAGACCG CAAATTGGAG GATAACTGGC GTTGGTCGAG TATGGGGAAT
GCCAATGTGG CGAACCTCAC TGTCTCAGCT ACTACACAAC AAATAGCTGA AAAAGAAGTA
GAAACTCCCG ATACTTATCT TTCTCAACTT CCTAAGACCG AAGCCGAAAT CGCTCAACTT
AACATCGATA GAAATAAAGC CTTGTACCAG TTGGGCGTGC TCTATCGCTC TAAATTCAGT
GAAAATGAAT TGGCTATACA ACGTTTAGAA CGTGTTCTTG CCAACAATCC TTCTCCCGAA
TTAGAAGTAG TTACACTTTA TGAGCTCCAA AAGAATTACA CTGATACTCA TAACCCCAAA
GCTGAAACCA TCAAAGGGCG ACTACTCGCT AACTATCCTA ATACCGATTA TGCAAAACTA
TTGCAAGGAA ACGAAACCTC ACAACAAGAG CGCAATAAAC AGGCACAAGT TTTTGTTGAT
ACCCTTATGG CTCGATACAA TCGCGGTGAA ATTATCGAGA CGGCTCACCA GTTGCAAACA
GAAGGGGCGC AGTATCGTGA AACTTCAGTA GCACCTGCTA TCGCACTGTT GCAAGCCAAA
ACAACGGCAC GTTTAGAGGG GCTTGCTCCT TACCAAGCGC AGTTACAACA GATAGCGACT
AACTATCCTG CCACTGCTGA AAGTGAAGAG GCTAAAAATC TATTAGATGA GCTTAAAGAT
GTAGAAACCG AAGATTTTGT TACTGACGAT AAGGCTACGA AATGGAAAGT AGTCATTACA
GGTACGGTTT CCGAGACACG TACAACTATA AAAGAACAAC TTACCCAGAA ATTAAAGGCA
ATTTCTGAAG TTCTCACTCT TTCAGAAGAC CTCTATAATG CCGATGAAAC TTGGTTGGTA
GTTCATAATA TCCGCGATGC TTATTCAGCT CAGAGCATTG TTACTGATTT GAAAGAGTTC
TTGGAGAAAA ACAAACTATC TGCTTTTGTT ATAGCCACTG AAAACTACCG ATTGGTACAA
ATTCGCAAAG ACAAAGAAAA ATTCTTGGAG AAAGAAAAGA ATGAAAACTA A
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| Protein sequence | MKRVLLYSSF LVVFLLYLAC TPNANTYYNR QMQPIVTKYN VLFNGEEAYA KGLNELREKY
QDNFSEILPV EPIGMTGKVQ LDGTGNADFQ RAEEKAIKTI QKHSMVFKGV QRNYKIDDAY
MLLGQARYYD ERFFPALEAF NHLLTNYGTS ERIPEAAVWA QKANLRLGKD KIAIEKLTEF
LKENPKLRKN DKAEAYATLG QAYINQEQYP EAADALYNAG KYTRNKALRG RYYFIAAQLY
EKQHQKDSAE VAFEKVVKQN WKIPRKLWVE AQAGKARNKT FTPEEKANFL AYLTKLERRY
EHKNYLDVLY YTHGELLKDD DKRLATDFYR SSLSNNKNNN PLKAKAHTRL SELFFDQKDY
TGAYQHLDST LTYIPEHTFE HLFIRRKRDN LSKIAELEYV VKKNDSVLKV MRLPETERRA
YYQKHIDSVQ KAIALRTQKQ HNKKVANTGM GVTMPDATTE KGGKFYFYNP MSVAYGKQQF
QQYWGDRKLE DNWRWSSMGN ANVANLTVSA TTQQIAEKEV ETPDTYLSQL PKTEAEIAQL
NIDRNKALYQ LGVLYRSKFS ENELAIQRLE RVLANNPSPE LEVVTLYELQ KNYTDTHNPK
AETIKGRLLA NYPNTDYAKL LQGNETSQQE RNKQAQVFVD TLMARYNRGE IIETAHQLQT
EGAQYRETSV APAIALLQAK TTARLEGLAP YQAQLQQIAT NYPATAESEE AKNLLDELKD
VETEDFVTDD KATKWKVVIT GTVSETRTTI KEQLTQKLKA ISEVLTLSED LYNADETWLV
VHNIRDAYSA QSIVTDLKEF LEKNKLSAFV IATENYRLVQ IRKDKEKFLE KEKNEN
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