Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_2025 |
Symbol | |
ID | 8368486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2423285 |
End bp | 2423644 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644984479 |
Product | hypothetical protein |
Protein accession | YP_003142130 |
Protein GI | 256820851 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase |
TIGRFAM ID | [TIGR00252] conserved hypothetical protein TIGR00252 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATGC ACAACGATTT AGGAAATGAA GGAGAACAAG ATGCCGTAAA CTTCCTAATT GAAAAAGGTC ATACTATTTT AGAACGCAAT TTTAGGTTTG GGCACGCCGA GATTGATATC ATTTCGCAAA AAGGTAATAT TTTGCATATC ACAGAAGTAA AAACACGTAG CTCAAGTGCT TATGGTGAAC CCGAGAGCTT TGTAAATCAG CAAAAGATAG AACTATTAGT GAAAGCTACC GATTTTTATA TAAAGAAAAA AGACTTAGAT GTAGAAATAC AATTCGATAT TATATCCATC GTAAAAAACA ATGCAGAATT TAGCTTAAAC TACATAGAAG ACGCTTTTTA TCCTTTTTAA
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Protein sequence | MAMHNDLGNE GEQDAVNFLI EKGHTILERN FRFGHAEIDI ISQKGNILHI TEVKTRSSSA YGEPESFVNQ QKIELLVKAT DFYIKKKDLD VEIQFDIISI VKNNAEFSLN YIEDAFYPF
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