Gene Coch_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2025 
Symbol 
ID8368486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2423285 
End bp2423644 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content33% 
IMG OID644984479 
Producthypothetical protein 
Protein accessionYP_003142130 
Protein GI256820851 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATGC ACAACGATTT AGGAAATGAA GGAGAACAAG ATGCCGTAAA CTTCCTAATT 
GAAAAAGGTC ATACTATTTT AGAACGCAAT TTTAGGTTTG GGCACGCCGA GATTGATATC
ATTTCGCAAA AAGGTAATAT TTTGCATATC ACAGAAGTAA AAACACGTAG CTCAAGTGCT
TATGGTGAAC CCGAGAGCTT TGTAAATCAG CAAAAGATAG AACTATTAGT GAAAGCTACC
GATTTTTATA TAAAGAAAAA AGACTTAGAT GTAGAAATAC AATTCGATAT TATATCCATC
GTAAAAAACA ATGCAGAATT TAGCTTAAAC TACATAGAAG ACGCTTTTTA TCCTTTTTAA
 
Protein sequence
MAMHNDLGNE GEQDAVNFLI EKGHTILERN FRFGHAEIDI ISQKGNILHI TEVKTRSSSA 
YGEPESFVNQ QKIELLVKAT DFYIKKKDLD VEIQFDIISI VKNNAEFSLN YIEDAFYPF