Gene Coch_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2006 
Symbol 
ID8368467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2397298 
End bp2398161 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content37% 
IMG OID644984460 
Producthypothetical protein 
Protein accessionYP_003142111 
Protein GI256820832 
COG category[S] Function unknown 
COG ID[COG3236] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02464] conserved hypothetical protein, ribA/ribD-fused 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.436059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATT ATTCAATTAT GGATTATATG ACTCCGCAGT GGATTAAATA TCCTGAACTT 
TCTGAATTTA CGATGGGCTG GCGTATGGGC TATGGCGAAG AGTACCGTTA CCATTTTTGG
GATTGGTACG ACACGCTTAC ATCCAAACAG CAACAAGAGT ATCAAAAGCT TTTTCCTTAT
CCTGTTTTTT GGCATCACAA CAATTGGAAA ATGATTAATA ATGACGGTAA ATTATCTCAA
GATATTGTTG ATAATGAAGA GGATTATTAC TTTGGAAGTA TTTCCTTTTG GCAACCTAAG
GGAATGTGTA AATATTCCAA AGAAACCTTT CTTAACTCTC CTAAAAAACT CAAGTTTCTC
TTCTTTTGGA AACCTAATGC CGATACCATA GATGAATCCT GTTTTTCACA ATGGCAACTT
TCGCCTTTTA ATGTAAATGC CGATGAATAT TCGTGTACTG AACAGTATAT GATGGCTGAA
AAAGCTCGTT TGTTTGACGA TGAAGAAGTA GAAAAGGAAA TAATGAACAC TACCGATCCT
AAGCTGATAA AATCTTTAGG TAGAAAGGTG CGCAATTTCG ACCCTGCCGT ATGGGATAAG
GTGAAATACA GTATTGTACT TAATGGCAAT TACTATAAAT TTACCCAAAA CCAAGCAATG
ATGGATTTTC TTTTATCTAC GGGTGATAAG ATATTAGTAG AAGCCAGTCC GTTAGACACC
ATTTGGGGTA TTGGTTTAGG TAAAGATAAC GAAAAAGCGT TCAACATCGC TTCGTGGCGT
GGTAAGAATC TCTTGGGGTT TGCCCTAATG GAAGTACGAG ATGAACTGCG CAAACTTTAT
AAGAATGCAC ACTTGTTGCT GTAG
 
Protein sequence
MINYSIMDYM TPQWIKYPEL SEFTMGWRMG YGEEYRYHFW DWYDTLTSKQ QQEYQKLFPY 
PVFWHHNNWK MINNDGKLSQ DIVDNEEDYY FGSISFWQPK GMCKYSKETF LNSPKKLKFL
FFWKPNADTI DESCFSQWQL SPFNVNADEY SCTEQYMMAE KARLFDDEEV EKEIMNTTDP
KLIKSLGRKV RNFDPAVWDK VKYSIVLNGN YYKFTQNQAM MDFLLSTGDK ILVEASPLDT
IWGIGLGKDN EKAFNIASWR GKNLLGFALM EVRDELRKLY KNAHLLL