Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_2006 |
Symbol | |
ID | 8368467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 2397298 |
End bp | 2398161 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644984460 |
Product | hypothetical protein |
Protein accession | YP_003142111 |
Protein GI | 256820832 |
COG category | [S] Function unknown |
COG ID | [COG3236] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02464] conserved hypothetical protein, ribA/ribD-fused |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.436059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAATT ATTCAATTAT GGATTATATG ACTCCGCAGT GGATTAAATA TCCTGAACTT TCTGAATTTA CGATGGGCTG GCGTATGGGC TATGGCGAAG AGTACCGTTA CCATTTTTGG GATTGGTACG ACACGCTTAC ATCCAAACAG CAACAAGAGT ATCAAAAGCT TTTTCCTTAT CCTGTTTTTT GGCATCACAA CAATTGGAAA ATGATTAATA ATGACGGTAA ATTATCTCAA GATATTGTTG ATAATGAAGA GGATTATTAC TTTGGAAGTA TTTCCTTTTG GCAACCTAAG GGAATGTGTA AATATTCCAA AGAAACCTTT CTTAACTCTC CTAAAAAACT CAAGTTTCTC TTCTTTTGGA AACCTAATGC CGATACCATA GATGAATCCT GTTTTTCACA ATGGCAACTT TCGCCTTTTA ATGTAAATGC CGATGAATAT TCGTGTACTG AACAGTATAT GATGGCTGAA AAAGCTCGTT TGTTTGACGA TGAAGAAGTA GAAAAGGAAA TAATGAACAC TACCGATCCT AAGCTGATAA AATCTTTAGG TAGAAAGGTG CGCAATTTCG ACCCTGCCGT ATGGGATAAG GTGAAATACA GTATTGTACT TAATGGCAAT TACTATAAAT TTACCCAAAA CCAAGCAATG ATGGATTTTC TTTTATCTAC GGGTGATAAG ATATTAGTAG AAGCCAGTCC GTTAGACACC ATTTGGGGTA TTGGTTTAGG TAAAGATAAC GAAAAAGCGT TCAACATCGC TTCGTGGCGT GGTAAGAATC TCTTGGGGTT TGCCCTAATG GAAGTACGAG ATGAACTGCG CAAACTTTAT AAGAATGCAC ACTTGTTGCT GTAG
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Protein sequence | MINYSIMDYM TPQWIKYPEL SEFTMGWRMG YGEEYRYHFW DWYDTLTSKQ QQEYQKLFPY PVFWHHNNWK MINNDGKLSQ DIVDNEEDYY FGSISFWQPK GMCKYSKETF LNSPKKLKFL FFWKPNADTI DESCFSQWQL SPFNVNADEY SCTEQYMMAE KARLFDDEEV EKEIMNTTDP KLIKSLGRKV RNFDPAVWDK VKYSIVLNGN YYKFTQNQAM MDFLLSTGDK ILVEASPLDT IWGIGLGKDN EKAFNIASWR GKNLLGFALM EVRDELRKLY KNAHLLL
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