Gene Coch_2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2002 
Symbol 
ID8368463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp2395456 
End bp2395872 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content42% 
IMG OID644984456 
Productthioesterase superfamily protein 
Protein accessionYP_003142107 
Protein GI256820828 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG AAACCTTGCA ACAACTGTGG GAAACACTAC CGCCTAATAA TTTAATGCGT 
GATTGGCAAA TGGAAATTGC TGAAATTACT GAAAGTACTA TTACTCTTAG TATGCCAGTT 
ACCGAACGCG TTACTCAGAT AGACGGGGTT CTTCACGGAG GGGCTACACT TGCGCTGGCA 
GAAACGGCAG GGAGTTTAGG AGCTTATTTG CTCTATCGAG AAGAAGGAGA GCAGATACGA 
GGTATAGAAC TAAGTGCTAA TCACGTGCGA GCAGGTAGGG TAGGGGATAC ACTCTATGCT 
AAGGCAATAT GTGTGAATGC AGGTAGAACG CTCCAGTTAT GGGAAATAAA AGTGACAAAT 
CAAGACGAAA AGCTTATCTC TTACTGCAAA TTTACCACTA TACGAATTAA TTACTAA
 
Protein sequence
MNKETLQQLW ETLPPNNLMR DWQMEIAEIT ESTITLSMPV TERVTQIDGV LHGGATLALA 
ETAGSLGAYL LYREEGEQIR GIELSANHVR AGRVGDTLYA KAICVNAGRT LQLWEIKVTN 
QDEKLISYCK FTTIRINY