| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1998 |
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| Symbol | |
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| ID | 8368459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2391929 |
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| End bp | 2393620 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644984452 |
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| Product | putative ABC transporter ATP-binding protein |
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| Protein accession | YP_003142103 |
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| Protein GI | 256820824 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.237018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGACG ATAAGAAAAT CATTTTCTCG ATGAATAAGG TAAGCAAAAC CTATTCATCT
ACTAATAAAC AGGTACTCAA AGATATTTAC CTAAGTTTCT TCTATGGAGC CAAAATCGGT
ATTTTAGGGC TTAATGGCTC TGGTAAATCC TCTCTGCTAA AAATTATTGC AGGAATAGAT
AAAAACTATC AAGGAGAAGT AGTATTTGCT CCTAATTATA CCGTAGGCTA TCTCGAACAA
GAGCCTCATC TTGATGATGA TAAAACTGTT ATTGAAGTAG TACGCGAAGG AGTAGCCGAA
ACAGTAAAAC TCTTAGAGGA ATTCAATCAT ATCAACGATC TTTTTGGGCT CGAGGAAAAC
TATTCTGACC CCGATAAGAT GCAAAAGCTG ATGGATAAGC AAGCCGAGTT ACAAGACAAG
ATAGATGCCT TGAATGCTTG GGAACTCGAC AATCAGTTAG AAGTAGCGAT GGAAGCCCTC
CGTACCCCTG AACCCAATAC GCCTATCAAA GTGCTTTCGG GAGGAGAACG CCGTAGGGTA
GCACTCTGCC GTCTGCTCTT GCAACAACCC GATGTTTTGT TACTCGACGA GCCAACTAAC
CACCTCGATG CAGAATCGGT ATTGTGGTTA GAACAGCATT TACAACAGTA TGCAGGTACA
GTTATAGCCG TTACCCACGA CCGTTATTTT TTAGACAATG TAGCGGGCTG GATATTAGAA
CTCGATCGTG GAGAAGGTAT TCCTTGGAAG GGCAATTACT CTTCTTGGCT CGACCAAAAA
GCTAAACGTT TGGCTCAAGA ACAGAAAACT GAAAACAAAC GTCAAAAAGT ATTGGAGCGT
GAGCTCGAAT GGGTACGTCA AGGAGCTAAA GGACGTCAAG CCAAACAAAA AGCACGTTTG
CAGAATTATG ACCGTCTGCT CAATGAAGAC CAAAAACAAT TAGAAGAAAA GTTGGAAATA
TATATTCCCA ACGGACCTCG TTTAGGAACT AATGTAATAG AAGCACGTCA CGTAGCCAAA
GCTTTTGGTG ATAAACTACT CTATGATGAT TTAAACTTTG TGCTTCCTCA AGCAGGAATA
GTAGGAGTGA TAGGTCCTAA TGGAGCAGGT AAATCTACTA TCTTCCGTAT GATAATGGGT
GAAGAACAGC CCGATAGTGG TGAGTTTCTG GTAGGTGACA CGGTGAAGAT AGCTTATGTA
GACCAAACTC ACAAACAAAT AGACCCCGAG AAGTCTATAT GGGAGAACTT TTCTGGTGGG
CAAGACCTCA TTATGATGGG GGGTAGACAA GTGAACTCTC GTGCTTATCT CAGTAGATTT
AACTTTGGTG GTAGCGAACA AAATAAAAAA GTAGCCACTC TTTCAGGAGG AGAACGCAAC
CGTTTACACT TGGCAATGAC TCTTAAAGAA GAGGGTAACG TATTACTGTT AGACGAGCCT
ACCAACGATT TAGACGTAAA TACTCTTCGC GCCTTAGAAG AAGGTTTAGA GAACTTTGCA
GGTTGTGCAG TAGTGATTTC ACACGACCGT TGGTTTTTAG ACCGTATTTG TACTCATATT
TTAGCTTTTG AAGGTGACTC ACAAGTGTAT TTCTTTGAAG GTAGCTTTTC AGAGTATGAA
GAGAATAAGA AAAAACGACT TGGCAAAGAA GTAACACCTA CTCGTATTAA GTATAAGAAA
TTAGTACGGT AA
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| Protein sequence | MADDKKIIFS MNKVSKTYSS TNKQVLKDIY LSFFYGAKIG ILGLNGSGKS SLLKIIAGID
KNYQGEVVFA PNYTVGYLEQ EPHLDDDKTV IEVVREGVAE TVKLLEEFNH INDLFGLEEN
YSDPDKMQKL MDKQAELQDK IDALNAWELD NQLEVAMEAL RTPEPNTPIK VLSGGERRRV
ALCRLLLQQP DVLLLDEPTN HLDAESVLWL EQHLQQYAGT VIAVTHDRYF LDNVAGWILE
LDRGEGIPWK GNYSSWLDQK AKRLAQEQKT ENKRQKVLER ELEWVRQGAK GRQAKQKARL
QNYDRLLNED QKQLEEKLEI YIPNGPRLGT NVIEARHVAK AFGDKLLYDD LNFVLPQAGI
VGVIGPNGAG KSTIFRMIMG EEQPDSGEFL VGDTVKIAYV DQTHKQIDPE KSIWENFSGG
QDLIMMGGRQ VNSRAYLSRF NFGGSEQNKK VATLSGGERN RLHLAMTLKE EGNVLLLDEP
TNDLDVNTLR ALEEGLENFA GCAVVISHDR WFLDRICTHI LAFEGDSQVY FFEGSFSEYE
ENKKKRLGKE VTPTRIKYKK LVR
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