| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1985 |
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| Symbol | |
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| ID | 8368446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2378816 |
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| End bp | 2379946 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644984439 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_003142090 |
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| Protein GI | 256820811 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATTTTG AAATACTAAA AACAGACGAA CATACTAAAG CACGTGCTGG GAAGATTACT
ACCAGCCACG GCGTGATTGA AACCCCCATT TTTATGCCTG TGGGAACGGT GGGAAGCGTG
AAAGGAGTGC ACCAACGCGA ACTGAAAGAC GATATTAATG CCGATATCAT CTTGGGGAAC
ACCTATCACC TCTATTTACG ACCTCAAACC CCCATTTTGG AAAAAGCAGG AGGCTTACAT
AAGTTTATTA ATTGGGATAG AAACATACTT ACCGATAGCG GTGGTTATCA AGTATATTCA
TTGGCTGCCA ACCGAAAGAT AAAAGAAGAA GGTGTAAAGT TCAAAAGTCA TATCGATGGC
TCTTTTCACG TTTTTTCACC CGAAAAAGTA ATGGAAATAG AGCGTAGTAT AGGTGCTGAT
ATTATGATGG CTTTTGATGA ATGCACGCCT TACCCTTGTG AATACGGTTA TGCAAAACGT
TCAATGCATC TCACGCATAG GTGGCTCGAT AGATGCATTG CTCACCTCGA AAAAGTACCT
CCTAAATACG GTTATCATCA AAGTTTATTC CCGATAGTAC AAGGGTCAGT CTATAAAGAC
CTTCGTACAC AGTCTGTCGA ATATATTGCA AGCAAAAATG CCGACGGAAA CGCTATCGGG
GGGCTATCAG TAGGTGAACC CGTAGAACAA ATGTATGAAA TAACTGAACT TGTATGCGAT
ATTCTCCCCA AAAACAAGCC CCGATACCTT ATGGGAGTGG GTACACCCGT TAATATATTG
GAAAATATTG CTTTGGGAGT GGATATGATG GATTGTGTAA TGCCCACACG CAATGCTCGC
AACGGAATGC TCTTTACTGC AAAAGGAATT ATCAATATTA AAAACAAAAA ATGGGAAGAT
GATTTCTCGT CCATAGACCC TGACGGACAT ACTTACGTAG ATACCTATTA CACGAAAGCC
TATTTACGTC ATTTATTCGC TGCTAACGAG TTTTTGGGTA AACAAATCGC TTCAATTCAC
AATCTTGGTT TCTATTTATG GCTTGTGAGG GAAGCTCGCC GACAAATTGT AGCGGGTACT
TTCCTTACGT GGAAGACAAA AATGGTTACT GATATGTCAA ATCGTCTTTA A
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| Protein sequence | MDFEILKTDE HTKARAGKIT TSHGVIETPI FMPVGTVGSV KGVHQRELKD DINADIILGN
TYHLYLRPQT PILEKAGGLH KFINWDRNIL TDSGGYQVYS LAANRKIKEE GVKFKSHIDG
SFHVFSPEKV MEIERSIGAD IMMAFDECTP YPCEYGYAKR SMHLTHRWLD RCIAHLEKVP
PKYGYHQSLF PIVQGSVYKD LRTQSVEYIA SKNADGNAIG GLSVGEPVEQ MYEITELVCD
ILPKNKPRYL MGVGTPVNIL ENIALGVDMM DCVMPTRNAR NGMLFTAKGI INIKNKKWED
DFSSIDPDGH TYVDTYYTKA YLRHLFAANE FLGKQIASIH NLGFYLWLVR EARRQIVAGT
FLTWKTKMVT DMSNRL
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