Gene Coch_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1979 
Symbol 
ID8368440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2372613 
End bp2373827 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content39% 
IMG OID644984433 
ProductFolC bifunctional protein 
Protein accessionYP_003142084 
Protein GI256820805 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0285] Folylpolyglutamate synthase 
TIGRFAM ID[TIGR01499] folylpolyglutamate synthase/dihydrofolate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATTATC AAGAAACACT TTCGTGGATG TTCAACCGCT TACCAATGTT TCAAACACAA 
GGTAAAACTG CTTTGAACAA CAAATTAGAT AATATCCTCG CCTTTACTTC GGTGTTAGGA
AACCCTCAAA CAAAATTCAA AAGTTTGCAT ATCGCAGGCA CTAACGGAAA GGGTTCTTCC
AGCAGTATGC TCGCTTCTAT CCTACAAGAG GCAGGATATA AGGTAGGATT GTACACTTCT
CCACACCTCA AAGACTTCCG AGAACGTATC AAAATTAATG GGAAGGAAAT ACCCGAAGAC
TATGTGGTAA GTTTTATAGC TAAAAACAGA CCTTTTTTGG AAGAATATCA CCTCTCATTC
TTCGAAATGA CAGTGGGAAT GGCGTTCAGC TATTTCGAGA ATGAAAAAGT AGATATCGCT
GTGATAGAAG TAGGTTTAGG AGGACGTTTT GACTCCACTA ATATTATCAC TCCCGAAGTT
TCTCTTATTA CCAATATCTC TAAAGACCAT ACTGATATTT TAGGAGATAC TTTACCTAAA
ATAGCTTTTG AAAAAGCTGG TATTATCAAA CAAAATGTGC CTGTAGTAAT CAGTGAATAT
CAAGAGGAGA CAGCTCCCGT CTTCACAGCA AAAGCTAAAG AAATGAATGC TCCTATTATT
TTTGCCAATC ACATAGAAAC TTCTCTTACA ACCGACCTTC AAGGTGCTTA TCAAGAGAAA
AACATCAAAG GAGTAATAGC CGTTACCGAA TTGCTTATCC ACCAGGGGTG GGATATTACT
CCGGAGAATA TTGCACAAGG ACTTTTACAC GTGGTGCACA ATACAAACCT GAAAGGTCGT
TGGCAAACCC TTGGCTCCTA CCCTACTATC GTATGTGATA CAGGACATAA TGTGGGCGGA
CTTACTTATG TGATGGAACA ACTCAAAAAG CAAACCTATA CACATCTTCA TATTGTAGTA
GGTTTTGTAA AAGAAAAAGA TGTAAATAGT GTTTTAGAGC TTTTCCCAAA AGAAGCTACC
TATTATTTTT GCAGTCCTGC TATTGCAAGA GGACTTAATG TAGATACATT AAAGAAAATT
GCTACTGCAA AAGGACTCCA AGGGGAGAGA TATTCTTCAG TAGCAGAAGC CTTAAATGCC
GCTAAGGCAC AAGCGCTTCC CACTGACTTT ATATTTGTTG GTGGAAGCAC GTTTGTAGTT
GCGGAAGTGT TGTAA
 
Protein sequence
MNYQETLSWM FNRLPMFQTQ GKTALNNKLD NILAFTSVLG NPQTKFKSLH IAGTNGKGSS 
SSMLASILQE AGYKVGLYTS PHLKDFRERI KINGKEIPED YVVSFIAKNR PFLEEYHLSF
FEMTVGMAFS YFENEKVDIA VIEVGLGGRF DSTNIITPEV SLITNISKDH TDILGDTLPK
IAFEKAGIIK QNVPVVISEY QEETAPVFTA KAKEMNAPII FANHIETSLT TDLQGAYQEK
NIKGVIAVTE LLIHQGWDIT PENIAQGLLH VVHNTNLKGR WQTLGSYPTI VCDTGHNVGG
LTYVMEQLKK QTYTHLHIVV GFVKEKDVNS VLELFPKEAT YYFCSPAIAR GLNVDTLKKI
ATAKGLQGER YSSVAEALNA AKAQALPTDF IFVGGSTFVV AEVL