| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1974 |
|---|
| Symbol | |
|---|
| ID | 8368432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 2366756 |
|---|
| End bp | 2367805 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 644984425 |
|---|
| Product | glutamine cyclotransferase |
|---|
| Protein accession | YP_003142079 |
|---|
| Protein GI | 256820800 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3823] Glutamine cyclotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.424232 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAC AACAGTTAAT TTGCATATTA AGTTTCTTAT TAATAGGAGC TTGCAAAAAT
GCAAATCCAC CTAAGCAAGA CGCTTTCAAT ATAGAACTGT ATCCTAAAAA GAAGGAATAC
CACATAGGAG AAGCTTTACA GATAAAAGTT GTGAATCCTA AATTTGAAGG TAAAATAGTA
AAGATTAGCT ATCAGTTTCA TCACCAAGAG CTTGTTGTTA CTAATGAGAA CATAGTACTT
GAAAACCTAA TGTTAGGTAA ACAGCCTTTA GAAGTAACTG TATATACTGA TAAAGGAGAA
GTTTATAAAG TACGAAAAGA AATTTTACTT TTGGCAGGAC AAGCTCCTAA ACTGTATACT
TATAAAATAC TAAATGAATA TCCCCACGAC AAACAGGCTT ATACTCAAGG TTTAGAATTT
ATAGGTGATA CTTTAGTAGA AAGCACAGGA CAATACCGAG AATCTTCCAT ACGCAAATGG
AATCCTTTTA CGGGCGAAAT GTACAAAAAT GTACCTTTAC AAGCAATGTA TTTTGGTGAA
GGAGCTACCG TTTTTAGAAA TAAAATAATC CAACTCACTT GGAGAGAAAA TATAGGATTC
GTATATGATG CTCAGCTAAA ATTGTTAAAA ACATTCTCTT ACAATAAAAG TAAAGAAGGT
TGGGGGCTCT GTCATAACGG TAGTGATAAA CTTTACAAAA GTGATGGTTC AGAAAAGATT
TGGATACTCA ATCCTAACAC TTTTGAAGAA GTAGACAGTT TACAACTATG TACTAATAAA
TCTATTTTTA CCAATGCTAA CGAATTAGAA TTTGTAGACG GGAAAATATA TGCTAATACT
TATCTAAAAG ATGGTATTAT GATTATCAAC CCCAATAATG GTGCTATAGA AGGCGTTGTA
GATGTACGAG GATTAAAAGA AAAAGTAGAA CAAACTCCTG ATTTAGATGT TCTTAATGGC
ATTGCTTATC ACGCTAGGCG TAATACTTTC TTCATCACGG GTAAGAATTG GAGTAAGATA
TTTGAGGTGG TTTTTATAAA CAAGAATTAA
|
|---|
| Protein sequence | MKLQQLICIL SFLLIGACKN ANPPKQDAFN IELYPKKKEY HIGEALQIKV VNPKFEGKIV
KISYQFHHQE LVVTNENIVL ENLMLGKQPL EVTVYTDKGE VYKVRKEILL LAGQAPKLYT
YKILNEYPHD KQAYTQGLEF IGDTLVESTG QYRESSIRKW NPFTGEMYKN VPLQAMYFGE
GATVFRNKII QLTWRENIGF VYDAQLKLLK TFSYNKSKEG WGLCHNGSDK LYKSDGSEKI
WILNPNTFEE VDSLQLCTNK SIFTNANELE FVDGKIYANT YLKDGIMIIN PNNGAIEGVV
DVRGLKEKVE QTPDLDVLNG IAYHARRNTF FITGKNWSKI FEVVFINKN
|
|---|
| |