Gene Coch_1972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1972 
Symbol 
ID8368430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp2364422 
End bp2365072 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content43% 
IMG OID644984423 
Productprotein of unknown function DUF208 
Protein accessionYP_003142077 
Protein GI256820798 
COG category[S] Function unknown 
COG ID[COG1636] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.140394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAG TCCACAAGAA TCTCGTATTG CCCAATAATG GCAAAAAGCT CTTGTTACAC 
ACTTGTTGTG CGCCTTGCTC GGGCTCTATT ATACTATCTA TTCAGGCATC GGGGATAGAG 
TTTACTATAT TTTTTTACAA CCCTAATATT CACCCTCAAA AAGAATACGA AATTCGCAAA 
GAGGAAAATA TACGCTTTGC CGAAAAGTGT GGCGTACCTA TTGTAGATGC CGAATACGAC 
ACCGATAACT GGTATACGCG TGCTAAAGGT ATGGAATTTG AACCCGAACG CGGTAGCCGT 
TGTGCAATGT GCTTTGATAT GCGTATGGAG CGTACGGCTT TATATGCTTA CGAAAACGGT 
TTCGATACCA TTGCGACCTC ACTGGGCATC TCTCGTTGGA AAGACCTCAA CCAAGTGAAT 
GAAGCAGGTA AAAATGCTGC CAATAAGTAC GAGGGACTTA CCTATTGGGA CTACAATTGG 
CGCAAAAACG GAGGTGCTGC CTGCAATATG GAAATCTGTA AAAACGAGAA ATTCTACCAA 
CAAGAGTACT GCGGTTGTGC TTTCTCGTTG CGCGATGCTA ACAAATGGCG AGTAGCCAAC 
GGAAGAGAGA AAATACGAAT AGGGGAAAAA TACTACGGAA GAGAAAAGTG A
 
Protein sequence
MELVHKNLVL PNNGKKLLLH TCCAPCSGSI ILSIQASGIE FTIFFYNPNI HPQKEYEIRK 
EENIRFAEKC GVPIVDAEYD TDNWYTRAKG MEFEPERGSR CAMCFDMRME RTALYAYENG 
FDTIATSLGI SRWKDLNQVN EAGKNAANKY EGLTYWDYNW RKNGGAACNM EICKNEKFYQ 
QEYCGCAFSL RDANKWRVAN GREKIRIGEK YYGREK