Gene Coch_1971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1971 
Symbol 
ID8368429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2363920 
End bp2364366 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content40% 
IMG OID644984422 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003142076 
Protein GI256820797 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.256736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACAT TTTTAAATAA AAGCAACATT ACACCAACCA TTGAAGATGA CGCTCACAGA 
CTTTTTTCAC TGTTGAGCAG GCGCTACCAA CAACGACTAT CTGACCTTTT TCAAGACAAA
ACTAAAGCAC CTTATGTAGT GGGTTATATA GAAGATGGAC GCCTACACGG AATGGCTTCT
ATGGCTATCT ACAGAGTGAT TTCGGGCTAT AAAGGTTGGA TAGAAGATGT GGTGGTAGAC
GAGATGGCAC GTGGAAAAAA AATAGGCACT CAGCTCATAC AACTTCTTAT CGCCAAAGGC
AAAGAATTGG GCTTAGGAGA AATATTACTC TTTACCTCGC CTACTAACGA AGCAGCTATT
AAGCTTTATG AAAATGAAGG CTTTAAACGT AAAGGTGCAG AGGTATATGT GAACGCTCTC
AAACAAATGT ACCCACCAGA ATCTTGA
 
Protein sequence
MITFLNKSNI TPTIEDDAHR LFSLLSRRYQ QRLSDLFQDK TKAPYVVGYI EDGRLHGMAS 
MAIYRVISGY KGWIEDVVVD EMARGKKIGT QLIQLLIAKG KELGLGEILL FTSPTNEAAI
KLYENEGFKR KGAEVYVNAL KQMYPPES