Gene Coch_1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1968 
Symbol 
ID8368426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp2362040 
End bp2362729 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content43% 
IMG OID644984419 
ProductSilent information regulator protein Sir2 
Protein accessionYP_003142073 
Protein GI256820794 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00937822 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA AGAAAATAGT AGTCCTCACG GGGGCAGGGA TTAGTGCTGA AAGTGGTGTA 
AAGACTTTTC GAGATGCCGA TGGCTTGTGG GAAGGTCACG ATATAGAACA AGTGGCAACA 
CCTTATGGTT TTGAGAAAGA CCCTGAACTT GTATTGAACT TCTACAACGG CTTGCGCAAA 
CAGGTGAAAA ATGTGCAACC TAACCCCGCT CACTTATTAT TAGCCGAGTT GGAAAAAGAG 
TACGACGTGG TGATCATCAC TCAAAATGTA GATGACTTGC ACGAACGTGC GGGTAGCCAT 
CACATTATTC ACTTACACGG AGAACTGCTA AAAATGCGGG GAGTAGATGA CCCCTATACG 
CTCTACGACT GTACTGACGA CATTAAAGTG GGCGACCTGA GCCCCAGTGG AGCACAATTA 
CGACCTCACA TCGTGTGGTT TGGCGAAGAT GTACCAATGA TTGTAAAGGC TGCCGAAGAG 
GTAGAAACTG CCGATATAGT GGTTATTGTA GGTACTTCAT TACAAGTGTA CCCCGCTGCT 
GGATTGATGA ACTGTGCCAA GAAAGATACA CCTATGTATT ATATAGACCC ACGTCCAAGC 
ATCAGTAGTA AAGATAAAAT CACTGTAATT AAAGACGTTG CTTCAACAGG GGTAGCTAAA 
GCTATTGAAC TAATAAAAGA ATTGAAATGA
 
Protein sequence
MKKKKIVVLT GAGISAESGV KTFRDADGLW EGHDIEQVAT PYGFEKDPEL VLNFYNGLRK 
QVKNVQPNPA HLLLAELEKE YDVVIITQNV DDLHERAGSH HIIHLHGELL KMRGVDDPYT 
LYDCTDDIKV GDLSPSGAQL RPHIVWFGED VPMIVKAAEE VETADIVVIV GTSLQVYPAA 
GLMNCAKKDT PMYYIDPRPS ISSKDKITVI KDVASTGVAK AIELIKELK