Gene Coch_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1966 
Symbol 
ID8368424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2360100 
End bp2361008 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content32% 
IMG OID644984417 
ProductN utilization substance protein B 
Protein accessionYP_003142071 
Protein GI256820792 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0692003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATCAA TTTATGCAAT GCGTCAGAGC CAAAGTCAGG ATTTAGACAA AGAATTGAAG 
TTCTTGCAAA ACAGTGCTGA TGAAATGCGA CACCTATATC TATTAATATT ATCACTTTTC
ATTGAACTGC ATTCTTTGGC AACTCATCAA CACAAAGTAG CTCAGAAAAA ATATTTGGCT
ACTACTGAAG AAAGAACAGT ACATCAAAAA TTCTCTGAAA ACCTTTTGCT CTTAGCCATT
GTTCATAATA CATTATTACA AGAAGCTATT GCTGATGCAC GTATAAATCA TTGGGAAATA
CACGAAGAGT ATGTGCGTAC TATATATAAA AACATTGTAG AAAGTGAGCT TTATAAGAAA
TACAACAAAC AAAAGAGCAG TTTTGAAGCT GATAAATCTT TTTTAATGAC TATTTTTGAA
GAAATTATAG CTCCCGATGA GACAATGTAT GAATATATTG AAGATTATAA TCTCACTTGG
GTAGATGATT ATCCCATTGT GAATACCTAT ATAAGTAGGT TATTTAGAGA AGTGCTCCCC
ACCTCACCTG ATAAATATTT TGTTCCTTCA CTTTATAAAG ATGAAGAAGA AAAAGATTTT
CTTACAGGGT TACTAAAAAA AGCAGTGCTC AATGATAGTA AGTGGGAGGA TGAAATTATT
ACTAGAATGA CAGGTTGGGA GAAAGATCGT GTGGCTGTAA TAGATAGTAT ATTGTTAAAA
ATGGCTGTTT GTGAAATGCT TAGTTTTCCT AGTATTCCAG TGAAAGTAAC ACTTAATGAA
TATTTAGAAC TTGCCAAGGA ATATTCTACT ACTAAAAGTA GTGCGTTTAT TAATGGTGTA
ATGAAAAATG TACATAAAGA ACTCGAAGAA AAACAACAAA TAAAAAAGAT AGGAAGAGGA
CTTTTATAA
 
Protein sequence
MQSIYAMRQS QSQDLDKELK FLQNSADEMR HLYLLILSLF IELHSLATHQ HKVAQKKYLA 
TTEERTVHQK FSENLLLLAI VHNTLLQEAI ADARINHWEI HEEYVRTIYK NIVESELYKK
YNKQKSSFEA DKSFLMTIFE EIIAPDETMY EYIEDYNLTW VDDYPIVNTY ISRLFREVLP
TSPDKYFVPS LYKDEEEKDF LTGLLKKAVL NDSKWEDEII TRMTGWEKDR VAVIDSILLK
MAVCEMLSFP SIPVKVTLNE YLELAKEYST TKSSAFINGV MKNVHKELEE KQQIKKIGRG
LL