| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1963 |
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| Symbol | |
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| ID | 8368421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2356922 |
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| End bp | 2358577 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644984414 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_003142068 |
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| Protein GI | 256820789 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02510] ribonucleoside-diphosphate reductase, alpha chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.760734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAG AAAAAGACAT TTGGTGGCTC AATGAAGAGT CTGAACAAAT CCTCAATAGA
GGCTATTTAC TAAAAGGAGA AAGCGTAGAA GGTGCGATAG ACCGCATTAC AAGTGCTGCT
GCACATAGGC TTTATAAACC CGAATTACAG CCTGCTTTCA AAGAAATGAT TACTAAAGGT
TGGATTAGTT TTTCATCTCC TATTTGGGCA AATATGGGTA CTGAAAGAGG TTTGCCTATT
TCTTGTTTCA ATGTGCACGT ACCTGATAGC ATCGAGGGGA TTACTCATAA ACTTGGAGAG
GTGATTATGC AAACCAAAAT AGGGGGAGGT ACTTCTGGTT ATTTTGGCGA ATTGCGTAGT
CGCGGTTCTG CAGTTACCGA TAATGGTAAA TCAAGTGGGG CGGTTAGTTT TATGAAGTTG
TTCGATTCAG CTATGGACGT TGTATCACAA GGAGGAGTAA GGCGCGGTGC TTTTGCTGCT
TATTTAGATA TAGACCATCC TGATGCCGAA GAGTTTCTAC AAATTAAAGA TGTAGAATTC
CCTATTCAGA ATCTTTTCTT TGGTATTTGT GTACCTGATT ATTGGATGCA AGAAATGATA
GATGGTGATG TAGAAAAACG TCGCCTATGG GCTCGTGTCT TGGAGTCTCG CCAGCAAAAA
GGTTTACCTT ACATTATCTT TACGGATAAT GCCAATCGTA ATCGCCCTCA AGTGTATAAA
GATAAGGATA TGCTCATTCG TTCAAGTAAC TTGTGCAGTG AGATTATGTT ACCTTCTAGT
GAAGATGAAT CGTTTATTTG CTGTCTTTCT TCTATGAACT TAGAGCTCTT TGATGAGTGG
AAAGATACCA AAGCAGTAAA GTTAGCGGTA TTCTTTTTAG ATGCGGTACT TTCAGAGTTT
ATAGAAAAAA CAAAGGGTAA TTACTATTTA CAGGCAGCTC GCAATTTTGC TATTCGTCAT
CGTGCTTTAG GTTTGGGTGT ATTAGGATAT CATTCTTACT TGCAACGCAA TATGATACCT
TTTGAGAGCT TTGAGGCAAC ACAGTTCAAT GCCCGTGCTT TTAGATACAT TCGTGAAGAA
GCTGATAAGG CAACTAAAGA GTTAGCTCAT ATTTATGGAG AACCAGAAAT TTTAAAAGGA
TATGGTAGAC GAAATACTAC TACTATGGCA ATCGCTCCTA CCACTTCCAG TTCGGCTATT
TTAGGACAGG TATCACCAGG TATCGAACCT TATTCGAGCA ATTACTATAA AGTAGGGCTT
TCTAAAGGGA ACTTTATGCG CAAAAATAAG TATCTCACTC AACTTTTGGA GGAAAAAGGT
CTTAATAATG AAGAGGTATG GCGTTCTATT CGTTTGAATA ATGGCTCTGT ACAACACTTG
CAAGAGTTAT CTCAATTAGA GAAGAATGTG TTTAAAACTT TTAAAGAGAT TTCACCGATG
GAAATTATAT CACAAGCGGC ACAGCGTCAA GCGTACATTG ACCAAACGCA GAGTTTGAAC
TTAAATATTC CTTCAGCGAT GCCTATTCGC GATGTGAATA AAGTGCTTAT TGAGGCTTGG
AAATTAGGAG TTAAAAGTTT GTATTATCAG CGCAGTCAAT CAGTAGCAAA AGAAATGATG
ATGAATTTTG TAAACTGTAG TAGTTGTGAA GCTTAA
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| Protein sequence | MNEEKDIWWL NEESEQILNR GYLLKGESVE GAIDRITSAA AHRLYKPELQ PAFKEMITKG
WISFSSPIWA NMGTERGLPI SCFNVHVPDS IEGITHKLGE VIMQTKIGGG TSGYFGELRS
RGSAVTDNGK SSGAVSFMKL FDSAMDVVSQ GGVRRGAFAA YLDIDHPDAE EFLQIKDVEF
PIQNLFFGIC VPDYWMQEMI DGDVEKRRLW ARVLESRQQK GLPYIIFTDN ANRNRPQVYK
DKDMLIRSSN LCSEIMLPSS EDESFICCLS SMNLELFDEW KDTKAVKLAV FFLDAVLSEF
IEKTKGNYYL QAARNFAIRH RALGLGVLGY HSYLQRNMIP FESFEATQFN ARAFRYIREE
ADKATKELAH IYGEPEILKG YGRRNTTTMA IAPTTSSSAI LGQVSPGIEP YSSNYYKVGL
SKGNFMRKNK YLTQLLEEKG LNNEEVWRSI RLNNGSVQHL QELSQLEKNV FKTFKEISPM
EIISQAAQRQ AYIDQTQSLN LNIPSAMPIR DVNKVLIEAW KLGVKSLYYQ RSQSVAKEMM
MNFVNCSSCE A
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