| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1961 |
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| Symbol | |
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| ID | 8368419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2354805 |
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| End bp | 2355770 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644984412 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_003142066 |
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| Protein GI | 256820787 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCCG TATTTTTAGA CCGCAACACG CTCTCTGAGC GCATAGATGT AGATATCCCG
AAAGGGATAG CCCAATGGGT AGCCTTCCAA AAAACAGCTC CCGATGAAAT TGTTCAACGT
CTCAAACCTG CTGATATAGC TATCGTGAAC AAGGTGAAAC TCGATGAGAG TATCCTTAGG
CAGTTGCCTA ACCTTAAGCT CATTCACCTT ACTGCTACGG GTATGGATAA TATCGATAAA
GAGGCTGCGA AAGCCTTGGG TATAGAAGTG AAAAACGTAG CGGGTTACTC TACTGAAAGT
GTAACAGAAC ACTTCTTCTT GTTGTTACTA TCGGCTATGC GTGCCCTAAA AACCTATCAC
ACAAGTGTAG AAGATGGTAC TTGGGAAAAA GATGGTCGTT TTTGCCTTAC TGAGCCACCG
GTGTTTGAAT TGCATACCAA AACCTTAGGG ATTATAGGAG TAGGCAACAT AGGGAAAGCT
ATTAGTAAAG TAGCTGAAGC CTTTGGTATG AAAGTGCTAT GGGCTGAACG CCAAGGTAAA
GCACCACGTA GTAAAGAATA TACTGAGTTC GACAAGGTAT TGGCACAGAG TGATATCATC
TCGCTTAACT GTCCGCTTAC TCCTGAGACT AAGCATTTAG TAGATGAAGA TTTCATCTCT
AAATTGCGTA AAAAACCATT AATTATCAAT ATGGCTCGTG GAGCTATAGT AGACCCTCAG
GCGGTATATG AAGCTATAGA AAGCAATCGT ATAATGGGCT TTGCTACCGA TGTGTTTGAA
GAAGAACCAC CAATGGCTAA CGACCCTCTA CTAAAAATAG CCAACCACCC TCGTGTGATT
TACACTCCTC ACGTGGCTTG GGCGAGCGAA TACGCACAAG ATAAGTTATG GCGTATCTTG
AAACGCCAAG TAGAAGATTT TATCGTAAAA TATAAAACAG AGCATAAGGA AAATGAAAAA
GCATAA
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| Protein sequence | MKAVFLDRNT LSERIDVDIP KGIAQWVAFQ KTAPDEIVQR LKPADIAIVN KVKLDESILR
QLPNLKLIHL TATGMDNIDK EAAKALGIEV KNVAGYSTES VTEHFFLLLL SAMRALKTYH
TSVEDGTWEK DGRFCLTEPP VFELHTKTLG IIGVGNIGKA ISKVAEAFGM KVLWAERQGK
APRSKEYTEF DKVLAQSDII SLNCPLTPET KHLVDEDFIS KLRKKPLIIN MARGAIVDPQ
AVYEAIESNR IMGFATDVFE EEPPMANDPL LKIANHPRVI YTPHVAWASE YAQDKLWRIL
KRQVEDFIVK YKTEHKENEK A
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