| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1957 |
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| Symbol | |
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| ID | 8368415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2351681 |
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| End bp | 2353045 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644984408 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_003142062 |
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| Protein GI | 256820783 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATAT CTCTCATTCA AAAATACAAT GTAGCTGGAC CTCGCTATAC TAGCTATCCT
ACTGTTCCCT ATTGGGATAG TAGTACTTTT TCTACTGAAA AATGGTTAGA GAGCTTACGA
AAATCCTATG CTGAGAGCAA TAGTACCGAA GGGATTAGCC TATACATTCA TTTGCCTTTC
TGTGAGAGTC TTTGTACTTT CTGTGGTTGT CATAAACGCA TTACTAAGCG TCACGAAATG
GAAGCCCCTT ATATAGAGGC AATACTTAAA GAATGGCAGT TATACACTGA TTTTTTGAAA
GAACGTCCTC GTATTAAGGA AATACACTTA GGGGGAGGTA CGCCTACCTT TTTTGAACCT
TTGCAGTTGC GTCGTTTGAT AGAAGGTATT TTTGAACGTG CTGATAAAGC TGATGCTCAC
GAATTTAGTT TTGAAGGTCA TCCTAATAAT ACCACTGAAA CTCACCTACA AACGCTTTAC
GACTTAGGTT TTAGGCGCGT GAGTTATGGC GTACAAGATT ATTCGCCTAA GATACAAAAA
GCCATTCACC GCATTCAACC TTTTGAGAAT GTAAAGCGTG TTACCCAGCA AGCCAGAGCT
ATCGGCTATA CCTCTGTAAG CCACGATTTG GTCTTTGGTT TACCGTTTCA AACCTTAGAC
GATGTACTCT TTACCATTGA TAGGAGTAAC ACTCTTCGTC CCGACCGTAT TGCTTTTTAT
AGCTATGCGC ACGTACCTTG GATAAAAGGC AGTGGGCAAC GTGGTTTTAA AGATGAAGAT
GTACCCACAG GCGAAGTAAA GCGAGAGCTA TATGAAGTAG GAAAACAATA CTTATTGAAA
GCAGGATATG CCGAAATAGG AATGGATCAC TTTGCTTTAC CTACTGATAG TATGTATAAG
GCTTTCAAAA ATCATCAATT GCATCGCAAC TTTATGGGCT ATACAGCCTC CAAAACCCAA
GTGATGATAG GCTTAGGAAT GTCTTCAATC AGCGATAGTT GGTACGGTTT TGCCCAAAAC
GAGAAAGATT TAGATGCTTA TTATGCACGT CTTGAGAAGA ATGAAATACC CGTGTGTAAA
GGGCATATTC TCAATAGAGA AGATTTAATT ATTAGGCGTC ATATTCTCAA CTTGATGTGT
CAGTTTACTA CTTCTTGGAA CGACGAATCT CTTCAGTTTC CTGAAATAAC AGAAGTAATA
ACACATCTAC AAGAGATGCA AAACGATGGT TTACTGCATA TAGCAGGTAA TCATATAGAA
GTCCCCGATG AGGGAAAACC TTTTATTAGA AATATCTGTA TGGCTTTTGA TTTGCACTTG
CAACGCAAAA TGCCTAATAC CAAAATATTT AGTATGACTG TGTAA
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| Protein sequence | MAISLIQKYN VAGPRYTSYP TVPYWDSSTF STEKWLESLR KSYAESNSTE GISLYIHLPF
CESLCTFCGC HKRITKRHEM EAPYIEAILK EWQLYTDFLK ERPRIKEIHL GGGTPTFFEP
LQLRRLIEGI FERADKADAH EFSFEGHPNN TTETHLQTLY DLGFRRVSYG VQDYSPKIQK
AIHRIQPFEN VKRVTQQARA IGYTSVSHDL VFGLPFQTLD DVLFTIDRSN TLRPDRIAFY
SYAHVPWIKG SGQRGFKDED VPTGEVKREL YEVGKQYLLK AGYAEIGMDH FALPTDSMYK
AFKNHQLHRN FMGYTASKTQ VMIGLGMSSI SDSWYGFAQN EKDLDAYYAR LEKNEIPVCK
GHILNREDLI IRRHILNLMC QFTTSWNDES LQFPEITEVI THLQEMQNDG LLHIAGNHIE
VPDEGKPFIR NICMAFDLHL QRKMPNTKIF SMTV
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