Gene Coch_1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1938 
SymboldnaA 
ID8368396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2323139 
End bp2324560 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content40% 
IMG OID644984390 
Productchromosomal replication initiation protein 
Protein accessionYP_003142044 
Protein GI256820765 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAG CAGCTGAAAA AGTCTGGAGT AGGTGTCTTG AATTCATAAA AGACAATATC 
ACTGAGCAAC CATTTAACAC TTGGTTCGCT CCTATCGTAC CTGTGGAATT AGAGGGCAAT
ACCCTAAAAA TCAAAGTGCC CAGTAAATTC TTTTGCGAGT GGTTAGAAGA AAATTATATT
TCTCTTCTCA AATCAGCTAT GACTTTTACC TTAGGTGTAA ACTCTCGCCT CGTATATATT
GTCGATACTC CTCTTACTAA AGAACAACTT CCTAGTACTA ATCGGCCAGA ATTAGCAAAA
CAGACTTTGA CTTTAGCTAC TGAAACCAAA GACCCTGGAC TTAAAAATCC TTTCGTAATA
CCGGGTATTC GCGAAATAAC TGTTGATCCT CAGCTGAACT TACATCAGAA CTTCGACAAC
TTTGTGGAGG GGGCTTCCAA TCGTTTAGCC CGCTCTGCAG GTATGGCAGT TGCCAATAAA
CCTGGGGGTA CGGCTTTCAA TCCGCTGTTT ATCTTCGGAG GAGTAGGCTT AGGTAAAACC
CACTTGGCAC ACGCAATAGG GGTAGATATC AAAGAAAAAT ACCCTAAAAA GAAGGTACTA
TACGTCTCTG CCGAAAAGTT CACTCAACAG TTTATCAGTG CTTCCACAGC CAAAGACAAA
GATAAAAATA CACTTAACGA CTTTATTCAC TTCTATCAGC TCATCGATGT GCTGATAGTC
GATGATATTC AGTTCTTATC AGGGAAGGTA AAAACCCAAG ATGCTTTCTT TCACATCTTC
AATCACCTGC ACCAAAATGG AAAACAGGTA ATTCTCACTT CCGATAAAGC ACCAGTTGAT
TTGTTCGATA TCGAACAGCG CTTGCTCTCT CGCTTCAAAT GGGGGCTTTC AGCCGAACTA
CAAACGCCCG ACTATGAAAC GCGCTATAAA ATATTAGAAA ATAAATTCTA TAATGATGGC
GCTGAAATAG GTGAGGATAT CATCGCTTAT TTAGCTGAAA ATATTCGTAC CAATGTGCGT
GAACTCGAAG GGGTGAGTAA TTCACTGATT GCACAAGCAG CTTTCAACCG CAAAGAGTAC
TCTATAGAAC TTGCACAAAG CATTATTGAT AAATCGGTGA AGAATAATCG AAACGATTTG
ACGATTGACC ATATTCAGCA AATCATCGCC GATTACTTTG GCTTAGATAT AGAATCCTTG
CATTCAAAAA CTAGAAAGCG TAATGTGGTT CAAGCACGAC AGTTGGCGAT GTTTTTTTCG
AAGAAATACA CCAAAAATTC ACTTTATACT ATTGGAAGCC AAATAGGACA ACGCGACCAC
GCTACGGTGC TACACGCTTG TAAAACGGTG GAAAATCTAA TAGAAACCGA CCGTGCATTC
AAGAAATATG TAAGTGATTT GGAAACTAAA TTCTCTGACT GA
 
Protein sequence
MKEAAEKVWS RCLEFIKDNI TEQPFNTWFA PIVPVELEGN TLKIKVPSKF FCEWLEENYI 
SLLKSAMTFT LGVNSRLVYI VDTPLTKEQL PSTNRPELAK QTLTLATETK DPGLKNPFVI
PGIREITVDP QLNLHQNFDN FVEGASNRLA RSAGMAVANK PGGTAFNPLF IFGGVGLGKT
HLAHAIGVDI KEKYPKKKVL YVSAEKFTQQ FISASTAKDK DKNTLNDFIH FYQLIDVLIV
DDIQFLSGKV KTQDAFFHIF NHLHQNGKQV ILTSDKAPVD LFDIEQRLLS RFKWGLSAEL
QTPDYETRYK ILENKFYNDG AEIGEDIIAY LAENIRTNVR ELEGVSNSLI AQAAFNRKEY
SIELAQSIID KSVKNNRNDL TIDHIQQIIA DYFGLDIESL HSKTRKRNVV QARQLAMFFS
KKYTKNSLYT IGSQIGQRDH ATVLHACKTV ENLIETDRAF KKYVSDLETK FSD