Gene Coch_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1937 
Symbol 
ID8368395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2322521 
End bp2322937 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content38% 
IMG OID644984389 
Productthioesterase superfamily protein 
Protein accessionYP_003142043 
Protein GI256820764 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAT TATATTTTGA TTATGTATTG CGTACACGCT ATGCAGAAAC TGACCAAATG 
GGGGTAGTGT ACTACGGAAA TTATCCTCAG TATCTTGAAT TGGGAAGAGT GGAGTGGCTA
AGGTCTATTG GCTTTACCTA TAAGGCGATG GAAGAAGAAG GAATAATGAT GCCTGTGGTA
TCCCTGCAAA TTCAGTATAA AAAGCCTGCT TTGTATGACG AGCTCATTAC TATTCGTACC
AAATTAAAAG AATTACCCTC TACAAAAATA GAGTTTAACT ATGAAATTCT CAATGAAAAA
GGAGAATTAC TCTCTACGGC TAATACTGTA TTGGTGTTTG TAGATGCGAA GACTTTCAGA
CCGGTGCGTT GCCCCGAGAA GGTGCTAAAG CTTATAAAAG CAAAAAGTGA AGAGTAA
 
Protein sequence
MKELYFDYVL RTRYAETDQM GVVYYGNYPQ YLELGRVEWL RSIGFTYKAM EEEGIMMPVV 
SLQIQYKKPA LYDELITIRT KLKELPSTKI EFNYEILNEK GELLSTANTV LVFVDAKTFR
PVRCPEKVLK LIKAKSEE