Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1937 |
Symbol | |
ID | 8368395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 2322521 |
End bp | 2322937 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644984389 |
Product | thioesterase superfamily protein |
Protein accession | YP_003142043 |
Protein GI | 256820764 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family [TIGR02799] tol-pal system-associated acyl-CoA thioesterase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAT TATATTTTGA TTATGTATTG CGTACACGCT ATGCAGAAAC TGACCAAATG GGGGTAGTGT ACTACGGAAA TTATCCTCAG TATCTTGAAT TGGGAAGAGT GGAGTGGCTA AGGTCTATTG GCTTTACCTA TAAGGCGATG GAAGAAGAAG GAATAATGAT GCCTGTGGTA TCCCTGCAAA TTCAGTATAA AAAGCCTGCT TTGTATGACG AGCTCATTAC TATTCGTACC AAATTAAAAG AATTACCCTC TACAAAAATA GAGTTTAACT ATGAAATTCT CAATGAAAAA GGAGAATTAC TCTCTACGGC TAATACTGTA TTGGTGTTTG TAGATGCGAA GACTTTCAGA CCGGTGCGTT GCCCCGAGAA GGTGCTAAAG CTTATAAAAG CAAAAAGTGA AGAGTAA
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Protein sequence | MKELYFDYVL RTRYAETDQM GVVYYGNYPQ YLELGRVEWL RSIGFTYKAM EEEGIMMPVV SLQIQYKKPA LYDELITIRT KLKELPSTKI EFNYEILNEK GELLSTANTV LVFVDAKTFR PVRCPEKVLK LIKAKSEE
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