Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1935 |
Symbol | |
ID | 8368393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2320663 |
End bp | 2321478 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644984387 |
Product | peptidase M48 Ste24p |
Protein accession | YP_003142041 |
Protein GI | 256820762 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAT TAACTTTAAT CGCATTCCTT TTAATTGTCT TTTCTTGTAA GACAAACCCT TTTACAGGAA AGAGTACCCT TAACTTTATG CCTAATAGTC AGGTATTTCC GATGGCTTTT AGTGAGTATT CCACCTTTTT AAAATCTAAT AAGGTAGTGA AAAACACAAA TGATGCCGCT ATGGTGAAAC GCGTAGGCGA ACGCATAGCC AAAGCTGCCA AACTATGGCT CGATACCAAT GGTTATAAAG GCTATTTAGA TGATTATCGT TGGGAATATA ACTTGGTAGA TAGTCCCGAG GTGAACGCTT GGTGTATGCC AGGGGGGAAG ATTGTGGTTT ATACGGGAAT TTTACCTATT ACACAATCCG AAACAGGTTT GGCAGTGGTA ATGGGGCACG AGGTGGCTCA CGCTTTAGCC GACCACGGGG CACAACGTAT GAGTGCTGCT ACCTTACAAC AAATAGGTGC TATTGCAGGT TCAGTAGCCT TGCAAACTAG CAAATACGCT GCTTATACCG ACCAGTTTAT GCTCGCTTAC GGCTTAGGGT CTAACTTAGG AGTAATGTTG CCCTTCAGTC GTTCCAACGA AACAGAAGCC GATGCCATAG GTATCCAGAT TATGGCAATT GCTGGGTATG ACCCCGCTGA GGCTCCTGAG CTATGGAAGC GTATGAGTGC CAAGAATAAT GGTAAATCTA CACCTACTAT TTTAAGTACC CACCCTTCTG ATGCCTCTCG TATCAAAAAC CTCACAGCCT TAGTACCCAA AGCACGTGCT GAAGCTGCTA AGTTTGGAGT CACCCATTTT CAATAG
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Protein sequence | MKKLTLIAFL LIVFSCKTNP FTGKSTLNFM PNSQVFPMAF SEYSTFLKSN KVVKNTNDAA MVKRVGERIA KAAKLWLDTN GYKGYLDDYR WEYNLVDSPE VNAWCMPGGK IVVYTGILPI TQSETGLAVV MGHEVAHALA DHGAQRMSAA TLQQIGAIAG SVALQTSKYA AYTDQFMLAY GLGSNLGVML PFSRSNETEA DAIGIQIMAI AGYDPAEAPE LWKRMSAKNN GKSTPTILST HPSDASRIKN LTALVPKARA EAAKFGVTHF Q
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