| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1929 |
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| Symbol | |
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| ID | 8368387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2314465 |
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| End bp | 2315616 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644984381 |
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| Product | hypothetical protein |
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| Protein accession | YP_003142035 |
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| Protein GI | 256820756 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0557173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTTGT TAGACGAGAA TGTACAACGC TTTATCAGGG AATACGAGGG GACAACTACA
ACATTGCTCC TCAAGAAACC TGTGTTCAAT GGTATTTCTA ACAAAGAGTT AGCACAACAG
ATTGAAGGTA GGCGCACAGC AGCTAAAAAA CTTCCTTTTT TGCTTACTAC GGAAAGTATA
TTGTTCCCTC CAACACTTAA TTTAGAGCAA ACCTCCTCCG AGGCAACCGC TCAATACAAG
GCTCAAGGCT TGCACGGAGA ACGTTTTTTA GATCTTACTT GTGGGTTTGG TATTGATGCA
TTTTTTCTTT CAGAGAAGTT TAAAGAAGTT ACGTTGGTAG AACAAAATAA GGAACTTCTC
AGCAAAGTAG AACATAATTG GCAGGTTCTA GGACGCAAGG CCACATTTAT AAATGGAAGC
ACAGAAGCTT TTTTGAAAGC TACAACAGCA CATTACAACC TTATTTTTCT CGATCCTGCT
CGTAGAGACG CTCTCAAACA AAAGAAGTTT CTCTTAGAAG ACCTCTCACC TAATATCTTA
GAGTTACAGT CTGTACTATT GCAAAAAACA GATAAAGTGT TTACCAAACT ATCACCTATG
ATAGATATTA GTTATCTGTT GCATACGCTA CCCAAGATAA CACATATTCA TTTGGTAGCC
TTACGCAATG AAGTAAAGGA GGTATTGGTA GTACAAGAAC CTAAAAAAGA AACGCAAGTA
CAAATACATT GTGTGAATTT GGAGACTGAA GAGCCTATTT TGCAATTTGC AGAAGAAGTG
TTGCATAGTT GTCAAGTGGT GTATAGTGCG CCTAAAAAGT ACTTGTATAT TCCTAATAGT
GCTTTGTTGA AATCAGGAGC TTTTAATTAT ATAACGCAAC GTTTTGAGGT AGAGAAGTTG
GACGTAAATA CTCATCTATA CACTTCCGAG CAGCTAAAAA AGCCCTTTGC CGGACGTGTT
TTGCAGGTAA CTCCTATCAA TCTTAAAGAG TTAAAAAAAG GTAGTAAATA TTGTATTCTC
TCTAAAAACT ATCCGTTATC GGTAGCAGAA ATTAAAAAGA AATACCGTAT CGTGGAAGGT
GGTAATGAAT ATCTTATCTT TACCCGTTCC GTTGAGGGGT TGGTCGTACT TTTAGGGAAG
GTAATCGAGT GA
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| Protein sequence | MNLLDENVQR FIREYEGTTT TLLLKKPVFN GISNKELAQQ IEGRRTAAKK LPFLLTTESI
LFPPTLNLEQ TSSEATAQYK AQGLHGERFL DLTCGFGIDA FFLSEKFKEV TLVEQNKELL
SKVEHNWQVL GRKATFINGS TEAFLKATTA HYNLIFLDPA RRDALKQKKF LLEDLSPNIL
ELQSVLLQKT DKVFTKLSPM IDISYLLHTL PKITHIHLVA LRNEVKEVLV VQEPKKETQV
QIHCVNLETE EPILQFAEEV LHSCQVVYSA PKKYLYIPNS ALLKSGAFNY ITQRFEVEKL
DVNTHLYTSE QLKKPFAGRV LQVTPINLKE LKKGSKYCIL SKNYPLSVAE IKKKYRIVEG
GNEYLIFTRS VEGLVVLLGK VIE
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