Gene Coch_1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1928 
Symbol 
ID8368386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp2313345 
End bp2314433 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content40% 
IMG OID644984380 
Productmagnesium and cobalt transport protein CorA 
Protein accessionYP_003142034 
Protein GI256820755 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.185921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAA ATATAGTCTC TACTACCAAG AGGAAACGCA AGGCAAATCG CTCCAAAAAG 
GTAGGTTTGC CTGCCGGTAG TCTGGTGTAT TTCGGTAATA AAGAGAAGCC TCTCAATATA 
GAAGTCTTTG CCTATAACGA GCATTCTTGT GAGGTAAAGA AAGTCTCTTC GGCTGAGGAA 
GCCCTTAAAT TTATAATCGA TAGCCGTATC ACGTGGGTGA ATGTAAACGG CTTAAACAAT 
ATCGAGGAAG TAAAAAAGTT AGGTGCTTAT ACTCATTTAG ATAACCTATT TTTGGAAGAC 
GTACTCGATA CCGAACACCG ACCTAAAGTA GAAATCCTCG ATGAACATAT TCTCGTGATC 
ATTAAAATGC TGTACTACGG CAAAGATAAG CAACTCATTT CAGAGCACTT AGCATTATTA 
TTGGGCAAAA ATTACCTCAT CACTTTTCAA GAAAGTGAAG ACGAAGACGT GTTTGACCCC 
GTACGCAAAC GTTTGCAAAA CGCCGATAGC AGTCTGCGCA AACGCCCCGC TGACTATTTG 
CTATTCGGAC TCTTAGATGC TATTGTAGAC AACTATTTTG TGATTTTGGA TAAAGTAAGC 
GATAAGATTG AGACCATTGA AGATGATATT ATTATTCACC CTCGTGAAGA TATGATTTCC 
GAAATCCAGT TGCTGAGAAA GAGTGCTATC TTTTTACAGA AATCAATTAC GCCCTCGCGT 
GAGGTAGTAA ACAAGATAGA GAAAACCCCT CATCATCTTA TCGACACCGA TACTAAGCAT 
TATTTCCGTG ACCTCCACGA CCACACGGTG CAAATTGTCG AAACACTCAG CACTTACCGC 
GATATCCTTT GGGGACTTAC AGATACTTAT ATGGGGGCAA TGAGTAACAA GATGAACAAC 
ATTATGCGCT TGCTCACCCT TATTTCTACT ATCTTTATTC CGCTCACTTT TATTGTGGGG 
GTATACGGTA TGAATTTCAA GTATATGCCT GAATTAGAAG TATGGTGGGC ATATCCGTTA 
GTATGGTTGG TGATGATAGG TATTTCAGTA ACAATGATTT TCTACTTCAA ACGCAAAAAA 
TGGCTTTGA
 
Protein sequence
MSKNIVSTTK RKRKANRSKK VGLPAGSLVY FGNKEKPLNI EVFAYNEHSC EVKKVSSAEE 
ALKFIIDSRI TWVNVNGLNN IEEVKKLGAY THLDNLFLED VLDTEHRPKV EILDEHILVI 
IKMLYYGKDK QLISEHLALL LGKNYLITFQ ESEDEDVFDP VRKRLQNADS SLRKRPADYL 
LFGLLDAIVD NYFVILDKVS DKIETIEDDI IIHPREDMIS EIQLLRKSAI FLQKSITPSR 
EVVNKIEKTP HHLIDTDTKH YFRDLHDHTV QIVETLSTYR DILWGLTDTY MGAMSNKMNN 
IMRLLTLIST IFIPLTFIVG VYGMNFKYMP ELEVWWAYPL VWLVMIGISV TMIFYFKRKK 
WL