| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1900 |
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| Symbol | |
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| ID | 8368358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2288266 |
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| End bp | 2290011 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644984352 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003142006 |
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| Protein GI | 256820727 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0705121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGGTAA TGAATGATAA TAAAATAGTA GTTTATCAGG TGCTTACAAG GCTTTTTGGC
AATACTAATA CCACTAATAA ACCTTGGGGG ACGATAGAAG AGAACGGTGT AGGTAAGTTT
GCTGACTTTA CTACAAAAGC TCTTGAAGAA CTCAAAGCAT TAGGTGTAAC ACATATTTGG
TTTACCGGGG TGTTACACCA CGCCCTTACT ACCGACTATA CGGCTTATGG CATCAGCAAC
GACTTTCCCG CAGTAGTAAA AGGTCGTGCG GGTTCGCCTT ATGCCATTAA GGATTACTAC
ACTGTAAACC CCGACCTTGC CGATGACCCT ACACAACGTT TGGAGGAATG GGAAGCTCTC
ATCGCCCGTA CCCACCAATG CGGACTGAAA GTAATAATGG ACATAGTGCC TAACCACGTG
GCACGTCGTT ATGAGAGTAT AGCCAAGCCG GAAGGCACAC GCGGTTTTGG TGAAGACGAT
GATACCACTG TACAATATGC GGTAAATAAC AATTTCTATT ACAATCCTAA TGAAGCTTTT
CAGTTGCCTG AGGGTATTTA TGGTGAGTAT CACGAGTTTC CTGCTAAATG GACGGGCAAT
GGGGCACGCG CTTCTAAACC CGACCGCAAT GACTGGTATG AAACGGTAAA ACTCAACTAC
GGAGTACGTC CCGACGGTAC TAAGGATTTT ATTGAACTAC CTGCAAGCTT TGAAAATGAA
GATACTGAAG CGCATTACTA CTTTTGGGCT GATAAAACAG TACCCGACAC TTGGAGAAAA
TTTAAAGATA TAGCCTTGTA TTGGCTCGGG AAAGGAGTAG ACGGCTTCCG TTATGATATG
GCTGAAATGG TGCCGGTGGA GTTCTGGAGT TATCTCAATT CGGCTATCAA GCACCAAAAT
CCAAAGGCAT TTTTATTGGC TGAAGTATAC AATCCTAATG AATATCGTCC TTATCTGCAT
TTGGGCAAGA TGGACTATCT ATACGACAAG GTGCAACTGT ACGACACTTT GCGCAATATT
GTGACTCACG GACACAGCAC TGATGCCATT GCCCCTATAC AGCACAACCT TGCTGATATT
GCACATCGTA TGTTACACTT CTTGGAGAAC CACGACGAAC AGCGCATAGC CTCGCCTGAG
TTTGCGGGAT ATGCTGAAAA AGCCAAACCA GCGATGACAG TCTCTACGTT TATTAGCGAG
TCGCCGGTGA TGCTGTATTT TGGTCAAGAA GTAGGGGAGA AAGCAGCAGA AGTAGCAGGA
TTTGGTAGTC CGTCGCGCAC GTCTATTTTT GATTATATAG GTGTTCCTGC ACACCAACGC
TGGGTGAATA ATAAGTGCTT TGACGGCGGT CAGTTATCAG AGGCAGAACG TTCTTTACGC
AATTTCTACC AGCGATTGCT CAACTTAAAA GTGAATGGGG CTTATATTGA TTTGCACCAA
TACAATCGGC AGCATACAGA GTATTACAAC GATAGGGTGT ACAGTTTTGC AAGAGGCAAT
GAGGACGAAC AGTGGGTGAT TGTGAGCAAC TTTAGTGAGC ACGACTACTT TGGTTTTGAC
TTGCAGTTGC CAGCTTACTT ATTGGGTAGT TGGTTTTTAA ACGATGGTAC TTATACGCTT
ACCGATGCTC TTTACAATGA AAAACACACT ACCTTACAGA TTGTAAACGG CAAAGGAAGA
TTGCGAGTAG ATATAGCGCC TTTGGAGTCT TTAATATTCA AAATTAGCAA ATTAGTAGAT
TCGTAA
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| Protein sequence | MGVMNDNKIV VYQVLTRLFG NTNTTNKPWG TIEENGVGKF ADFTTKALEE LKALGVTHIW
FTGVLHHALT TDYTAYGISN DFPAVVKGRA GSPYAIKDYY TVNPDLADDP TQRLEEWEAL
IARTHQCGLK VIMDIVPNHV ARRYESIAKP EGTRGFGEDD DTTVQYAVNN NFYYNPNEAF
QLPEGIYGEY HEFPAKWTGN GARASKPDRN DWYETVKLNY GVRPDGTKDF IELPASFENE
DTEAHYYFWA DKTVPDTWRK FKDIALYWLG KGVDGFRYDM AEMVPVEFWS YLNSAIKHQN
PKAFLLAEVY NPNEYRPYLH LGKMDYLYDK VQLYDTLRNI VTHGHSTDAI APIQHNLADI
AHRMLHFLEN HDEQRIASPE FAGYAEKAKP AMTVSTFISE SPVMLYFGQE VGEKAAEVAG
FGSPSRTSIF DYIGVPAHQR WVNNKCFDGG QLSEAERSLR NFYQRLLNLK VNGAYIDLHQ
YNRQHTEYYN DRVYSFARGN EDEQWVIVSN FSEHDYFGFD LQLPAYLLGS WFLNDGTYTL
TDALYNEKHT TLQIVNGKGR LRVDIAPLES LIFKISKLVD S
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