| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1893 |
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| Symbol | |
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| ID | 8368351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2275606 |
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| End bp | 2278443 |
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| Gene Length | 2838 bp |
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| Protein Length | 945 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644984345 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_003141999 |
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| Protein GI | 256820720 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0808708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA AAACAAATAA TGTAACTCCC ACTGATGTAC TTGAAGTTCA AGGCGCACGG
GTGCATAACC TCAAAAATAT AGACCTTACC ATACCTCGCG AAAAGCTTGT CGTCTTTACA
GGGCTTTCTG GTAGTGGCAA GTCCTCTTTG GCATTCGATA CTATTTATGC CGAAGGACAA
CGCCGTTATA TCGAGACTTT CTCGGCTTAT GCTCGCCAGT TTCTCGGGGG ATTAGAGCGC
CCTGATGTAG ATAAAATCGA CGGATTATCA CCTGTGATTG CTATCGAACA GAAAACTACC
TCCAAATCAC CGCGTTCTAC GGTGGGTACT ATCACCGAAA TCTACGACTT CTTGCGCCTG
CTATTTGCCC GTGCTTCCGA TGCTTATAGC TATGCAACAG GCGAAAAGAT GGTGAGTTAT
ACCGATAGCC AAATTCAGGA ACTCATTACC AAAGAATACA AAGGCAAACG CATTAACCTA
TTAGCGCCCG TGGTTCAATC TAGAAAAGGA CATTACCGCG AGCTTTTTGA GCAGATTGCT
AAACAAGGCT TTGTAAAGGT GCGTACCGAT GGCGAAATTC GTGATATCGA AAAAGGTATG
AAGCTCGACC GTTACAAAAC ACACGATATT GAAATCGTGA TTGACCGTAT GCAAATAGAC
GATACTGATG ACACCCAAAA ACGCCTGCAA GAAAGTATCA AAATTGCAAT GAACTACGGC
AACGATGTGT TAATGGTTTT AGAACACGAC CAAAAAAAGG CTCACTATTT CAGCAGACAT
TTGATGTGTC CTTCTTCGGG CATTTCATAT CCTCTTCCTG AACCTAATAC TTTCTCATTC
AATTCTCCTA AAGGAATGTG CCCGCACTGC AATGGGTTGG GTGAAGTGCA AGAAATCAAC
CTCTCCAAAA TTATCCCTGA TCCTTCTATC TCTATCAAGA ACGGTGGAAT TACAGCGGTA
GGAGAGCAAA AGAACACTTG GATATTCAAA CAATTAGCGC TCATTGTACA AAAGTTCGGT
CATAAACTCT CCGACCCAAT AAATAGTCTT CCAAAAGAAG CAATGGATAT CATTCTATAT
GGAGGTAAAG ATAAATACGC TATCAAATCG GAAGTCTTGG GCATTACACG TAATTTTGAA
ATTGATTTCG AAGGTATCAT CAACTTCATC AAAAGTCAGC ACGAAAATGC CGATATGGCA
GCTATCAAGC GCTGGGCTGA AGAGTTTATG GATACCATTC CTTGTGAAGA TTGCCACGGC
ACTCGCTTAC GTAAAGAAGC GCTTTACTTT AAAATAGCTG ATAAAAATAT AGCTGAACTC
TCGGCTTTAG ATATCACTGA TTTATTGGCG TGGTTCAAAT CACTACCCAA ACATCTCTCT
ACCAAACAAC ACAAAATAGC AGAAGAAATC ATCAAAGAAA TCACCACCCG ACTTCAATTC
CTCATAGATG TAGGACTTAC TTATTTAGCC CTTAACCGAA GTTCTAAATC ATTATCGGGA
GGAGAAGCAC AGCGCATCAG ACTGGCAACA CAGATAGGAT CACAACTCAC AGGGGTACTC
TATATACTTG ATGAACCTAG CATTGGTTTG CATCAGCGAG ATAACAAAAG GCTTATCAAC
TCACTAAAAT CACTTAGAGA TATTGGTAAC TCAGTAATCG TGGTAGAACA CGATGAAGAA
ATGATACAAG AAGCCGATTA TGTAGTAGAT ATAGGACCTA AAGCGGGCGT AAATGGAGGA
GATATTATCT TTCAAGGAAC GCCTAAAGAG TTGCTAAAAG CAAATACCAT CACCGCTGAC
TATATGAGTG GGAGAAAACA AATTGAAATA CCTACTCAAA GGCGCAAAGG CAACGGCAAA
GAAATTATCC TAAAAGGCTG TACAGGCAAC AATCTGAAGA ACGTAACCGT AAAATTCCCC
TTAGGGGTAA TGATAGGGGT AACAGGCGTA TCGGGAAGTG GAAAATCAAC GCTTATTAAC
GAGACACTGT ATCCTATCTT AAACGCTCAC TTCTTTAATG GCATAAAAAA ACCGATGCCT
TACAAAAGTA TTGAAGGCTT AGAACATATT GATAAGGTAA TCGATATCGA CCAATCACCT
ATTGGGCGCA CGCCACGTTC AAATCCTGCT ACCTACACAG GTGTTTTCAG TGAGATACGT
AACCTTTTCA CCCAAGTACC TGAAGCACAA ATACGTGGCT ATAAACCAGG TAGATTTAGT
TTCAATGTAA AAGAGGGAAG ATGTGAAAGT TGTGAGGGAT CAGGCTTAAA AGTGATTGAG
ATGAATTTCC TACCCGATGT ATATGTGCCT TGCGAGACCT GCAAAGGAAA ACGTTTCAAC
CGCGAAACGC TTGAGGTGCG CTACAAAGGA AAATCTATTG CCGATGTGCT AGATATGACC
ATAAGTGAGG CCGTAAAATT CTTTGAACCC ATTCCTAAAA TATATCGCAA ACTAAAAACT
ATTGAAGAGG TAGGTTTAGG ATATATTACC CTCGGACAGC AATCTACTAC TTTATCGGGA
GGGGAAGCCC AAAGGGTAAA ATTGGCTACT GAGCTATCGA AAATTGATAC AGGAAATACC
TTTTACATAT TAGATGAACC TACTACAGGG CTACATTTTG ACGATGTGAA GGTACTCCTC
GAAGTACTCG ATCGTTTGGT AGATAAAGGT AATACTGTTT TAGTGATAGA GCACAACCTC
GATGTCATCA AAAAAGTAGA TTATATCATA GATATAGGGT ATGATGGAGG GAAAGCAGGT
GGCGAAGTAA TAGCCTTTGG TACTCCAGAA GAGGTAGCTA AAAACAAGAA GAGTTTCACT
GCCGAGTATC TAAGATAA
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| Protein sequence | MKKKTNNVTP TDVLEVQGAR VHNLKNIDLT IPREKLVVFT GLSGSGKSSL AFDTIYAEGQ
RRYIETFSAY ARQFLGGLER PDVDKIDGLS PVIAIEQKTT SKSPRSTVGT ITEIYDFLRL
LFARASDAYS YATGEKMVSY TDSQIQELIT KEYKGKRINL LAPVVQSRKG HYRELFEQIA
KQGFVKVRTD GEIRDIEKGM KLDRYKTHDI EIVIDRMQID DTDDTQKRLQ ESIKIAMNYG
NDVLMVLEHD QKKAHYFSRH LMCPSSGISY PLPEPNTFSF NSPKGMCPHC NGLGEVQEIN
LSKIIPDPSI SIKNGGITAV GEQKNTWIFK QLALIVQKFG HKLSDPINSL PKEAMDIILY
GGKDKYAIKS EVLGITRNFE IDFEGIINFI KSQHENADMA AIKRWAEEFM DTIPCEDCHG
TRLRKEALYF KIADKNIAEL SALDITDLLA WFKSLPKHLS TKQHKIAEEI IKEITTRLQF
LIDVGLTYLA LNRSSKSLSG GEAQRIRLAT QIGSQLTGVL YILDEPSIGL HQRDNKRLIN
SLKSLRDIGN SVIVVEHDEE MIQEADYVVD IGPKAGVNGG DIIFQGTPKE LLKANTITAD
YMSGRKQIEI PTQRRKGNGK EIILKGCTGN NLKNVTVKFP LGVMIGVTGV SGSGKSTLIN
ETLYPILNAH FFNGIKKPMP YKSIEGLEHI DKVIDIDQSP IGRTPRSNPA TYTGVFSEIR
NLFTQVPEAQ IRGYKPGRFS FNVKEGRCES CEGSGLKVIE MNFLPDVYVP CETCKGKRFN
RETLEVRYKG KSIADVLDMT ISEAVKFFEP IPKIYRKLKT IEEVGLGYIT LGQQSTTLSG
GEAQRVKLAT ELSKIDTGNT FYILDEPTTG LHFDDVKVLL EVLDRLVDKG NTVLVIEHNL
DVIKKVDYII DIGYDGGKAG GEVIAFGTPE EVAKNKKSFT AEYLR
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