Gene Coch_1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1891 
Symbol 
ID8368349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2271322 
End bp2272455 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content36% 
IMG OID644984343 
Productdomain of unknown function DUF1735 
Protein accessionYP_003141997 
Protein GI256820718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.617686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA TATTTTTAAT ACTTGGCTTA CTAAGTGTAA TAGCTTGTCA AGACGAAACT 
ACTGACAAAA CGCCTCAAGC TCCCAATGTA TATCAGGGAG TATTTCTCGA TGGCAATAAC
GTCGTTGAAG TGTACGTACA AGAATACCAA GATAACAAGA TTCAAAACTT AAAGGTGAAA
CTGATAAGAG CTGCTGGTAA GATAGTATCA GCTCAGCTTA TCACAGGTGA TGCTCAAACC
TTAACCGACT ATAATGCACA ATATGGTACG GATTACAAAC TCTTACCTAC TGATAAATAT
AGTATTGATG AAAATGCTAT CTTCAATACT TATGAAACAG AAACTCCTAT TGATATTACC
ATTAGTGAAC TAACGTTTCC TAACAACGAA GTGTATGCGC TACCCATACA AATAAGAGGT
AGAAATAATA TTGAAGCTAT TGCAGGACAA GACCGTTTGC TTTTAGTAGT CCATAAAGAA
ACAAGAACAA AGGTATTGAG TATGGCAACT ACAAAAGCTA CTACGGGAGA AGCTCTATCT
AATAACGAGC TCTCTCAATG GACTTTTGAA GCTACAATTA ATTGCTCAAA TCTCATAGGA
AGCAACCCAA TAGTAGGAGT AACATCTAAT ACTCATCAAG TTGAAATAGG CTTTACAAAC
AATCAATTAG ACGTAAAAGC TTCGGGTATT TCAAAATTAA TACCTGCTGA GGTATTTAAG
GCACAAACTA ATAAATGGTA TCCTATTGCA GTAACCTGTG ATGGCAATAC CCTGCGTGTA
TATGTAGAAG GAAAAGAGGT AGGTTCTAAA ACAGCAAATA CTAATAGTAG AATTTATGTA
AAAGATTTAT GGTTTGCAGG AGCTAATGAG CTTCTGAGAG AGGTGCGTTT GTGGAAACGA
GCCCTAACCC AAAAAGAAAT ACAATTACAG TTGTGGAGTA CTCTTAAACC TACAAATGAT
TTACTGCTTT ATTATCCTCT CAATGGTAAG AAATATAATA AAACTTCTAA TACCATTACA
GATGATGAAA CAAAACTATG GGATTGGTCT ACTACAGGCA CCTCAATGGA ACTTCCCTCA
GGAGCAACTT TTAATAACGG TACAGGTTAT GGTATTGTTT TTCCTCCTAG ATGA
 
Protein sequence
MKKIFLILGL LSVIACQDET TDKTPQAPNV YQGVFLDGNN VVEVYVQEYQ DNKIQNLKVK 
LIRAAGKIVS AQLITGDAQT LTDYNAQYGT DYKLLPTDKY SIDENAIFNT YETETPIDIT
ISELTFPNNE VYALPIQIRG RNNIEAIAGQ DRLLLVVHKE TRTKVLSMAT TKATTGEALS
NNELSQWTFE ATINCSNLIG SNPIVGVTSN THQVEIGFTN NQLDVKASGI SKLIPAEVFK
AQTNKWYPIA VTCDGNTLRV YVEGKEVGSK TANTNSRIYV KDLWFAGANE LLREVRLWKR
ALTQKEIQLQ LWSTLKPTND LLLYYPLNGK KYNKTSNTIT DDETKLWDWS TTGTSMELPS
GATFNNGTGY GIVFPPR