| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1888 |
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| Symbol | hppA |
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| ID | 8368343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2263811 |
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| End bp | 2266570 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644984337 |
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| Product | membrane-bound proton-translocating pyrophosphatase |
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| Protein accession | YP_003141994 |
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| Protein GI | 256820715 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3808] Inorganic pyrophosphatase |
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| TIGRFAM ID | [TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.640223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAA TGATGTTATA TCTACCGTTA GTCCTTGCTG TTCTTGGACT TATCTTTATG
ATTACGAAAG CTTCGTGGGT GAACAAACAA ACCACAGGCA ACGAGCGGAT GCAAAGCATT
TCCAAAAGTA TCAAAGAAGG TGCGATGGCA TTCCTCAATG CTGAGTATCG TATTTTGACA
CTCTTTGTGA TTATTGCCTC TATTGCTTTA TTTATCGTTT CTCGTATGGT AGAAACTTCT
CACTGGCTTA TTGTAGTAGC TTTTGTGTGT GGAGCTTTCT TCTCTGCCTT AGCGGGAAAT
ATAGGAATGC GTATTGCTAC CAATGCTAAC GTACGCACTA CCGAAGCAGC TCGCACTAGC
TTGCCAAAAG CTTTGAAAGT ATCTTTTGGT GGTGGTACTG TGATGGGATT AGGAGTGGCA
GGTTTGGCTG TATTGGGCTT GAGCTTGTTC TTTATCCTCT TTGTGAACAC TTTCGTAGGA
GGAGGCAAAC CTTTCTACGA CGAAATGACT CTCGTACTCG AAGCCTTAGC AGGTTTCTCA
CTCGGTGCTG AGTCTATTGC GCTCTTTGCT CGTGTAGGTG GTGGTATTTA CACCAAAGCT
GCCGACGTAG GGGCTGACCT CGTAGGTAAA GTAGAAGCTG GTATCCCTGA AGACGACCCT
CGTAACCCTG CTACTATTGC CGACAACGTA GGTGATAACG TAGGTGACGT AGCTGGTATG
GGTGCTGACT TGTTCGGTTC GTATGTGGCT ACTGTACTCG CTTCAATGGT ATTGGGTAAC
TATGTGATTA AAGATATAGC AACTGCCAAT GGTGGTGCTT TCACCGATGC CTTTGGTGGT
TTAGGCCCTA TCTTATTGCC GTTAGTAATT GCTGGTGTAG GTATCATTGC TTCAATTATT
GGTACTTTCT GTGTAGGTAT CAAAAACAAC GATGCTAAAG AAAAACAAGT ACAAAGTTCA
CTAAATACAG GTAACTATGT AGCTTTAGCA CTTACTTTAG TAGCTTGCTA TTTTCTTATC
GAATATATGT TACCCGAAAC TATCCAAATG AGTTTCTTTG GTGAAGGAGT AAAAGAAATT
GCAAGTATCA ATGTATTCTA CGCAACTATC GTAGGTTTGG CAGTAGGCTT GCTCATTTCA
GCTATTACTG AACACTTTAC CGCTTTGGGT AAAAAACCGG TATTGAATAT CGTACGCAAT
TCATCTACTG GAGCTGCTAC CAACATTATT GCAGGTTTGG CAACTGGTAT GAAATCAACT
TTTGGTTCTG TACTGCTTTT TGCTGTAGCT ATTTGGGGTT CTTATGCCTT AGCAGGTTTC
TATGGTGTGG CGATTGCAGC ATCAGCAATG ATGGCAACTA CAGCTATGCA ATTGGCTATT
GACGCTTTTG GTCCTATTGC TGATAATGCT GGGGGTGTAG CCGAAATGAG TGAATTGCCA
AAAGAAGTGC GTCAACGTAC TGATATTTTA GACTCAGTAG GAAATACTAC TGCTGCGGTA
GGTAAAGGAT TTGCTATTGC ATCAGCAGCT CTTACCGCCT TAGCCTTGTT CGCTGCTTAT
GTGACCTTTA CAGGCATTTC TGGTATCAAT ATTTTCAAAG CAAACGTATT AGCTGCCTTG
TTTATCGGAG GTATGATTCC AGTAATTTTC TCAGCCTTGG CAATGCAATC AGTAGGGAAA
GCTGCTATGG ATATGGTGAA CGAAGTACGT CGCCAATTCC GTGAAATTCC TGGTATTATG
GAAGGTAAAG GTACTCCAGA GTATGGTAGA TGTGTAGATA TTTCTACCAA AGCTGCTTTG
CGCGAAATGA TGTTACCTGG TGCTATTACT ATCATCACTC CTATTATTAT CGGTTTTGTG
ATGGGTGCTG AAGCTCTTGG CGCTTATATG GCTGGTGTAG CTGTATCAGG GGTTGTATGG
GCTATCTTCC AAAACAACGC TGGTGGTGCT TGGGACAATG CTAAGAAATC ATTTGAAGCA
GGTGTTGAAA TCAACGGACA AATGACTTAC AAAGGTTCTG ACGCTCATAA AGCTGCCGTT
ACTGGTGATA CTGTAGGTGA CCCATTCAAA GATACTTCAG GCCCTTCAAT GAATATCCTT
ATCAAACTCA CTTGCTTGGT AGGTTTGGTA ATTGCTCCTA TCTTGGGTGG ACATACTGCC
GATGCTTCAG GTACTCCTAT AGAAGCTCAA ATTCGTCAAG GTGAAGGTGA GGGAGTGATG
CCTGTGGAAG AAGTAGTAGT TATTGAAGAA GGTAAGCTTA ACGCCGATGG TGACTTCGAG
TACAATGTAG GTGATTTATT CCAATTGAGC CTTTTCGATA ATACAATGTT AGAAGTAGGT
AAAAATTCAT CTGAAGCTCA TCTTGTAAAA TTGATAGAAG ATAAAAACCT TACTACTCTA
GAACAATTCA AAGATAACTG GATTACTTTG GATAGAACTT ACTTCAAAAC AGGTAGCGAT
GAACTTACTG AAGGTTCAGA ACAACAATTA AAGAACATTG TAGCTATTTT GAAAGCTTAT
CCTAAAGCTG CTATTCGTTT AGGAGGTTAT ACTGATAATA CGGGTAGTGT TGAAGGTAAC
AAAAAACTTT CAGAAAGACG TGCTAATTCA GTGTTAAACA AATTAGTGGC ATTGGGTGCT
AACAAAGCAC AATTGAGCGC TCAAGGTTAT GGTGCAGAAC ACCCTCTTTG TCCTGCTAAC
GATACTCCTG AGTGCAAAGC TAAGAACAGA CGTATCGACA TACGTTTGAC TGCTAAATAA
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| Protein sequence | MDKMMLYLPL VLAVLGLIFM ITKASWVNKQ TTGNERMQSI SKSIKEGAMA FLNAEYRILT
LFVIIASIAL FIVSRMVETS HWLIVVAFVC GAFFSALAGN IGMRIATNAN VRTTEAARTS
LPKALKVSFG GGTVMGLGVA GLAVLGLSLF FILFVNTFVG GGKPFYDEMT LVLEALAGFS
LGAESIALFA RVGGGIYTKA ADVGADLVGK VEAGIPEDDP RNPATIADNV GDNVGDVAGM
GADLFGSYVA TVLASMVLGN YVIKDIATAN GGAFTDAFGG LGPILLPLVI AGVGIIASII
GTFCVGIKNN DAKEKQVQSS LNTGNYVALA LTLVACYFLI EYMLPETIQM SFFGEGVKEI
ASINVFYATI VGLAVGLLIS AITEHFTALG KKPVLNIVRN SSTGAATNII AGLATGMKST
FGSVLLFAVA IWGSYALAGF YGVAIAASAM MATTAMQLAI DAFGPIADNA GGVAEMSELP
KEVRQRTDIL DSVGNTTAAV GKGFAIASAA LTALALFAAY VTFTGISGIN IFKANVLAAL
FIGGMIPVIF SALAMQSVGK AAMDMVNEVR RQFREIPGIM EGKGTPEYGR CVDISTKAAL
REMMLPGAIT IITPIIIGFV MGAEALGAYM AGVAVSGVVW AIFQNNAGGA WDNAKKSFEA
GVEINGQMTY KGSDAHKAAV TGDTVGDPFK DTSGPSMNIL IKLTCLVGLV IAPILGGHTA
DASGTPIEAQ IRQGEGEGVM PVEEVVVIEE GKLNADGDFE YNVGDLFQLS LFDNTMLEVG
KNSSEAHLVK LIEDKNLTTL EQFKDNWITL DRTYFKTGSD ELTEGSEQQL KNIVAILKAY
PKAAIRLGGY TDNTGSVEGN KKLSERRANS VLNKLVALGA NKAQLSAQGY GAEHPLCPAN
DTPECKAKNR RIDIRLTAK
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