Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1887 |
Symbol | |
ID | 8368341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 2262499 |
End bp | 2263236 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 644984335 |
Product | biotin/acetyl-CoA-carboxylase ligase |
Protein accession | YP_003141993 |
Protein GI | 256820714 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.595914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATCA TTACCTTAAA AAGCATTGAT TCTACTAATC AGTACTTAAA AAATTTAATA CATATTCAGG ATTCTCTTCC TAATTTTTTA GTGGTCTGGA CTCCTCAGCA AACTGCAGGT ATAGGACAAT ATGGAACAAA ATGGACAAGT GAACCCTATC AGAATCTTAC TTTTAGTATT TTATTCCTTC CTGAGCATTT AGATTTAAAA GATGCTTTTT TGCTCAATAT GCTTGTACCT ATTGCAATAA TGAAAGTATT AGAGAAATTA AACATTCCTA ATATAAATAT TAAATGGCCT AATGATATCC TTTCTCAACG TTACAAAATA GGCGGAATAT TAATAGAAAA TACTATTAGA AAAACTAAAA TTGAGAAATG TATAATCGGT ATTGGGCTCA ATCTTAACCA AACAAGTTTC GATGGCTTAC CTAAAGCCTC TTCTTTAAAA AAATTAACTG GCAAAGATTT TCAAGTAGAA CAAGTGATGA AACTAATCTT TTCTGAATTA AAATCAAACC TTTCTACACT TCCTCAACAG TCTTTCGAAA GCATTTATAC TATTTACCAG AAGTACCTAT TCCAACTAAA TAATAGAGTA TCCGTTTTCC GTTCTTGCCA AGAAAAGAAC TTTTCAGGCA TTATAAGAGG TGTGGAACCT TCTGGGAAAT TAATTGTAGA AACGGAACAA GGGGTTATAA AGACTTTTTC TCTTAAAGAA ATAACTTTAT TATACTAA
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Protein sequence | MNIITLKSID STNQYLKNLI HIQDSLPNFL VVWTPQQTAG IGQYGTKWTS EPYQNLTFSI LFLPEHLDLK DAFLLNMLVP IAIMKVLEKL NIPNINIKWP NDILSQRYKI GGILIENTIR KTKIEKCIIG IGLNLNQTSF DGLPKASSLK KLTGKDFQVE QVMKLIFSEL KSNLSTLPQQ SFESIYTIYQ KYLFQLNNRV SVFRSCQEKN FSGIIRGVEP SGKLIVETEQ GVIKTFSLKE ITLLY
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