Gene Coch_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1887 
Symbol 
ID8368341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2262499 
End bp2263236 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content30% 
IMG OID644984335 
Productbiotin/acetyl-CoA-carboxylase ligase 
Protein accessionYP_003141993 
Protein GI256820714 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.595914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATCA TTACCTTAAA AAGCATTGAT TCTACTAATC AGTACTTAAA AAATTTAATA 
CATATTCAGG ATTCTCTTCC TAATTTTTTA GTGGTCTGGA CTCCTCAGCA AACTGCAGGT
ATAGGACAAT ATGGAACAAA ATGGACAAGT GAACCCTATC AGAATCTTAC TTTTAGTATT
TTATTCCTTC CTGAGCATTT AGATTTAAAA GATGCTTTTT TGCTCAATAT GCTTGTACCT
ATTGCAATAA TGAAAGTATT AGAGAAATTA AACATTCCTA ATATAAATAT TAAATGGCCT
AATGATATCC TTTCTCAACG TTACAAAATA GGCGGAATAT TAATAGAAAA TACTATTAGA
AAAACTAAAA TTGAGAAATG TATAATCGGT ATTGGGCTCA ATCTTAACCA AACAAGTTTC
GATGGCTTAC CTAAAGCCTC TTCTTTAAAA AAATTAACTG GCAAAGATTT TCAAGTAGAA
CAAGTGATGA AACTAATCTT TTCTGAATTA AAATCAAACC TTTCTACACT TCCTCAACAG
TCTTTCGAAA GCATTTATAC TATTTACCAG AAGTACCTAT TCCAACTAAA TAATAGAGTA
TCCGTTTTCC GTTCTTGCCA AGAAAAGAAC TTTTCAGGCA TTATAAGAGG TGTGGAACCT
TCTGGGAAAT TAATTGTAGA AACGGAACAA GGGGTTATAA AGACTTTTTC TCTTAAAGAA
ATAACTTTAT TATACTAA
 
Protein sequence
MNIITLKSID STNQYLKNLI HIQDSLPNFL VVWTPQQTAG IGQYGTKWTS EPYQNLTFSI 
LFLPEHLDLK DAFLLNMLVP IAIMKVLEKL NIPNINIKWP NDILSQRYKI GGILIENTIR
KTKIEKCIIG IGLNLNQTSF DGLPKASSLK KLTGKDFQVE QVMKLIFSEL KSNLSTLPQQ
SFESIYTIYQ KYLFQLNNRV SVFRSCQEKN FSGIIRGVEP SGKLIVETEQ GVIKTFSLKE
ITLLY