| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1880 |
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| Symbol | |
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| ID | 8368333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2253699 |
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| End bp | 2254463 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644984327 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | YP_003141986 |
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| Protein GI | 256820707 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTAC TTAATGAACG ACAATCAAAG ATTTTGGAGA GCTTAGAAAC CAAAAAGTAC
GTTAGTGTAA ATGAATTGAG TGATAGGCTT AAAGTTTCGG TAGTTACTAT ACGTAAAGAC
CTTAATCTCT TGGAACAGGA AGGCTATTTG CATCGTACTC ACGGTGGAGC TAGTAAACAA
ATGCGCTATG TGTTTGAGCA AACAATAACT GAGAAAGAAA CTCAAAATGT AGAAGAGAAA
ACGCGTATTA TTACTAAAGC GTTGGACTTT ATTAAAGAAA ATGAGTTTAT CATACTTTCA
TCAGGAACTA CAGCTAATCT TTTAGCTCAA AAAATTTATG GCATACGCAA CCTTACAGTA
CTCACTCCTT CCCTCAGAGT AGCTTTAGAA GTCTGCAAAA ATCCTAGTGT AAATACCATT
CACTTAGGAG GAGAAGTTCG TAAAAACTCT ACCTCCACTA TTGGCGTACT TGCTGAAGAA
ACTCTTAGTA ACTTCTCTTG TACTACTTTA TTTTTAGGCG TTGAAGGTAT TGACCTTGAT
TATGGATTGA GTTCAACCAA TGTAGGAGAA GCCCATCTAA ATCGGAAGAT GATGGAACGC
GTAGACAAAA CGATTGTTTT GGCTGACTCC TCTAAAATTC ACAAACGAGG CTTTGGTTTT
ATCTGTTATG TAGAGAAAAT AGATATGCTT ATCACTGATG CAGGTGCTGA CCCTGAGTTT
GTAGAAGAAC TTGAAAAACG CGGTGTAGAA GTAATTATTT GTTAA
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| Protein sequence | MKVLNERQSK ILESLETKKY VSVNELSDRL KVSVVTIRKD LNLLEQEGYL HRTHGGASKQ
MRYVFEQTIT EKETQNVEEK TRIITKALDF IKENEFIILS SGTTANLLAQ KIYGIRNLTV
LTPSLRVALE VCKNPSVNTI HLGGEVRKNS TSTIGVLAEE TLSNFSCTTL FLGVEGIDLD
YGLSSTNVGE AHLNRKMMER VDKTIVLADS SKIHKRGFGF ICYVEKIDML ITDAGADPEF
VEELEKRGVE VIIC
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