Gene Coch_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1874 
Symbol 
ID8368327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2248450 
End bp2248971 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content32% 
IMG OID644984321 
Producthypothetical protein 
Protein accessionYP_003141980 
Protein GI256820701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATTTA AGAGTTATTT AAAATTCCTT TTAAAATCTA CCAATGAGCA CGGGGTGCAC 
TCACCTTTTG TCTACAACTT TGTAACTCGT TGCTTGTACA ATAAACAATT AGTAAACCAT
CAAGAAATCA AGGGTTTTCC TCCTACCCTA TCCAAAAGAC AATTGGTGTT ATTATTGAAG
ATTATTCGTT ATTTAGAGGT AAAAACTATT TTCACTGATG AAGATATGCT AAATAGTATA
ACTGCTATAA AAGAAACCTG TAACATTAGC TTTCAGTTGC AACCATCTGT TACATACGAC
TTGCTTTTTA TCAATTACCC AAAAGAAGAT TTAAGTATTT ATTTAAATTA TATGCACAAC
GATAGTATTC TTATCATCAA CAATATTTAC CAAAAAGAAA AAGCCTCCCT ATGGCAAGCT
CTTACTGCTA ATGAAAAGGT TACGGTGTAT ATAGACGTCT ACTCCCAAGG CTATATTTTC
ATAAGAAGAG AACAAGGAAA AGAAGGGTTC TATATAAGGT AA
 
Protein sequence
MPFKSYLKFL LKSTNEHGVH SPFVYNFVTR CLYNKQLVNH QEIKGFPPTL SKRQLVLLLK 
IIRYLEVKTI FTDEDMLNSI TAIKETCNIS FQLQPSVTYD LLFINYPKED LSIYLNYMHN
DSILIINNIY QKEKASLWQA LTANEKVTVY IDVYSQGYIF IRREQGKEGF YIR