Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1871 |
Symbol | |
ID | 8368324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 2243972 |
End bp | 2246047 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644984318 |
Product | phosphate acetyltransferase |
Protein accession | YP_003141977 |
Protein GI | 256820698 |
COG category | [C] Energy production and conversion |
COG ID | [COG0280] Phosphotransacetylase |
TIGRFAM ID | [TIGR00651] phosphate acetyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAAT CTGTTTATAT CATCGCTACC AATGCACACA GCGGTAAGTC GGTGGTGAGT TTGGGTGTGT TGCAAATGAT TATGCGCAAC ACTGCTAAGG TAGGTTATTT TAGACCTATT GTAGAAAGTA AATCTAAAAA AGACACTTTC ATCGAGACTG TCTTGGAGCA CTTTCAGCTC GATATGAGTT ACGATGAAGC CTATGCCTAC ACACGTCAGG AGGTTATCGC TCTTAAAAAC GAAGGCAATA TAGGGGAAGT ATATGACACT ATCATCAAAA AATATAAAGC CTTAGAAAGC AAATTCGACT TTGTTTTAGT GGATAGTTCA AGTACTATAG ACGATAGCTA TTTCGACACA AACTTCAACG CTTCGGTAGC ACAAAGTCTC AACATTCCTG CTTTGATAGT GCTTAAAGAC AACTTTTCAT CAGAAGTTGA ATTGGTGAAC CAAGTACAGG AAGATCTTAA CAACTTCTTG GAAAAAGATT TGCGCGTACT TAGCGTATTT GTAAATAAGG CTACCAATGC TACTGCTGAT ACGCTCAGCA AATTAGAACA ACGCTTTAAA GATATAACCT TCACTTTGAT TCCGCGCAAA GAAGAGCTTT CACGCCCTAC TATCCGCGAG ATAGCCAATG CACTCAACGT TGAATTCCTT TACAAAGGCG ATAATATAGA CGTTACCACC AAACGTACCA TTGTGGGAGC TATGCAACTT TCTAACTATT TAGCCAAACT AAACGAAGAT ACTTTGGCTG TACTCCCTAC TGACCGTATT GACCTCATAG CAGGTTCTTT GGTGGCTAAC TATTCCAATT TCTCTAATAT CAAAGGGGTA GTACTATACG GCGACTTAAC CCCCGACCCT TCAATGAGTA AAATTTTAGA TGGTATCCAA AAGAACATTC CTATAATGAT AGCTAAAACA GATACTTTTG AAACTGCTAA TATCATTGGG AATACAAAAT CAAGCATCTA TCCTGAAAAT ACTGAAAAGG TAAAAATGCT TCTTCAACTA TTTGATGAAA ATGTAGATGC TGCGAAACTC AACAGCAGTA TAGCCTCTTT CAAATCGGAA ACTATTACCC CTCGTATGTT TCAATACAAT ATGGTACAAA AAGCACGTGC AGGACAAAAA CGCATTGTGT TACCAGAAGG TACTGACGAC CGTATTCTTA CTGCGGCTTC TCAATTGGCA GAGGACGAAC TCGTTTACCT CACTATCTTG GGAGAACCGG AAGCAATTAA AACACGAGCT AAGAACATTT TGGGCTTGAA ATGGAACGAA GAGCGTATCA GTATTATCAA TCCCGCTGAA AGTGATAAAT ATGAGGCGTA TGCTGAAAAA CTATACGAAT TGCGCAAGAG CAAAGGATTG GAGCTTTCGC AAGCCAAAGA CTTAATGCTT GATGCGTCTT ATTTCGGTAC AATGATGGTA TTCTTAGGCG ATGCTGATGG TATGGTATCA GGAGCAGTAA ACACTACAGC CCACACTATC CGTCCGTCTT TGCAATTTGT AAAGACAAAA CCAGGGGTGA ACACGGTATC ATCAGTATTC TTTATGCTCT TGCACGACCG CGTACTAGTA TATGGTGACT GCGCCGTAGT GCCTAACCCC ACTGCTGAAC AATTAGCCGA TATCGCTATT AGCTCTGCCG ACTCAGCTAT TGCTTTTGGT ATTGAACCTA AGGTAGCACT CCTCTCCTAC TCTTCTGGTA ATTCTGGTAG TGGTGCCGAT GTAGACAAAG TGCGTGAAGC AACAGCACTT GTAAAAGAGC GTCGCCCCGA GTTACTCGTA GAAGGACCTA TACAATATGA CGCTGCGGTA GACCCAAAAG TAGGGAAACA AAAGATGCCA AATTCACCTG TAGCAGGACA AGCCAATGTG CTTATTTTCC CCGACCTTAA CACCGGTAAT AACACCTATA AGGCGGTGCA ACGCGAAACA GGCGGTTTAG CCATAGGTCC TATGCTACAA GGATTAAAGA AACCCGTAAA CGACCTCAGT CGTGGGGCTC TTATCCCGGA TATTTACAAC ACTGTACTTA TCACTGCGAT ACAATCAGAG TTTTAG
|
Protein sequence | MNKSVYIIAT NAHSGKSVVS LGVLQMIMRN TAKVGYFRPI VESKSKKDTF IETVLEHFQL DMSYDEAYAY TRQEVIALKN EGNIGEVYDT IIKKYKALES KFDFVLVDSS STIDDSYFDT NFNASVAQSL NIPALIVLKD NFSSEVELVN QVQEDLNNFL EKDLRVLSVF VNKATNATAD TLSKLEQRFK DITFTLIPRK EELSRPTIRE IANALNVEFL YKGDNIDVTT KRTIVGAMQL SNYLAKLNED TLAVLPTDRI DLIAGSLVAN YSNFSNIKGV VLYGDLTPDP SMSKILDGIQ KNIPIMIAKT DTFETANIIG NTKSSIYPEN TEKVKMLLQL FDENVDAAKL NSSIASFKSE TITPRMFQYN MVQKARAGQK RIVLPEGTDD RILTAASQLA EDELVYLTIL GEPEAIKTRA KNILGLKWNE ERISIINPAE SDKYEAYAEK LYELRKSKGL ELSQAKDLML DASYFGTMMV FLGDADGMVS GAVNTTAHTI RPSLQFVKTK PGVNTVSSVF FMLLHDRVLV YGDCAVVPNP TAEQLADIAI SSADSAIAFG IEPKVALLSY SSGNSGSGAD VDKVREATAL VKERRPELLV EGPIQYDAAV DPKVGKQKMP NSPVAGQANV LIFPDLNTGN NTYKAVQRET GGLAIGPMLQ GLKKPVNDLS RGALIPDIYN TVLITAIQSE F
|
| |