Gene Coch_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1871 
Symbol 
ID8368324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2243972 
End bp2246047 
Gene Length2076 bp 
Protein Length691 aa 
Translation table11 
GC content41% 
IMG OID644984318 
Productphosphate acetyltransferase 
Protein accessionYP_003141977 
Protein GI256820698 
COG category[C] Energy production and conversion 
COG ID[COG0280] Phosphotransacetylase 
TIGRFAM ID[TIGR00651] phosphate acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT CTGTTTATAT CATCGCTACC AATGCACACA GCGGTAAGTC GGTGGTGAGT 
TTGGGTGTGT TGCAAATGAT TATGCGCAAC ACTGCTAAGG TAGGTTATTT TAGACCTATT
GTAGAAAGTA AATCTAAAAA AGACACTTTC ATCGAGACTG TCTTGGAGCA CTTTCAGCTC
GATATGAGTT ACGATGAAGC CTATGCCTAC ACACGTCAGG AGGTTATCGC TCTTAAAAAC
GAAGGCAATA TAGGGGAAGT ATATGACACT ATCATCAAAA AATATAAAGC CTTAGAAAGC
AAATTCGACT TTGTTTTAGT GGATAGTTCA AGTACTATAG ACGATAGCTA TTTCGACACA
AACTTCAACG CTTCGGTAGC ACAAAGTCTC AACATTCCTG CTTTGATAGT GCTTAAAGAC
AACTTTTCAT CAGAAGTTGA ATTGGTGAAC CAAGTACAGG AAGATCTTAA CAACTTCTTG
GAAAAAGATT TGCGCGTACT TAGCGTATTT GTAAATAAGG CTACCAATGC TACTGCTGAT
ACGCTCAGCA AATTAGAACA ACGCTTTAAA GATATAACCT TCACTTTGAT TCCGCGCAAA
GAAGAGCTTT CACGCCCTAC TATCCGCGAG ATAGCCAATG CACTCAACGT TGAATTCCTT
TACAAAGGCG ATAATATAGA CGTTACCACC AAACGTACCA TTGTGGGAGC TATGCAACTT
TCTAACTATT TAGCCAAACT AAACGAAGAT ACTTTGGCTG TACTCCCTAC TGACCGTATT
GACCTCATAG CAGGTTCTTT GGTGGCTAAC TATTCCAATT TCTCTAATAT CAAAGGGGTA
GTACTATACG GCGACTTAAC CCCCGACCCT TCAATGAGTA AAATTTTAGA TGGTATCCAA
AAGAACATTC CTATAATGAT AGCTAAAACA GATACTTTTG AAACTGCTAA TATCATTGGG
AATACAAAAT CAAGCATCTA TCCTGAAAAT ACTGAAAAGG TAAAAATGCT TCTTCAACTA
TTTGATGAAA ATGTAGATGC TGCGAAACTC AACAGCAGTA TAGCCTCTTT CAAATCGGAA
ACTATTACCC CTCGTATGTT TCAATACAAT ATGGTACAAA AAGCACGTGC AGGACAAAAA
CGCATTGTGT TACCAGAAGG TACTGACGAC CGTATTCTTA CTGCGGCTTC TCAATTGGCA
GAGGACGAAC TCGTTTACCT CACTATCTTG GGAGAACCGG AAGCAATTAA AACACGAGCT
AAGAACATTT TGGGCTTGAA ATGGAACGAA GAGCGTATCA GTATTATCAA TCCCGCTGAA
AGTGATAAAT ATGAGGCGTA TGCTGAAAAA CTATACGAAT TGCGCAAGAG CAAAGGATTG
GAGCTTTCGC AAGCCAAAGA CTTAATGCTT GATGCGTCTT ATTTCGGTAC AATGATGGTA
TTCTTAGGCG ATGCTGATGG TATGGTATCA GGAGCAGTAA ACACTACAGC CCACACTATC
CGTCCGTCTT TGCAATTTGT AAAGACAAAA CCAGGGGTGA ACACGGTATC ATCAGTATTC
TTTATGCTCT TGCACGACCG CGTACTAGTA TATGGTGACT GCGCCGTAGT GCCTAACCCC
ACTGCTGAAC AATTAGCCGA TATCGCTATT AGCTCTGCCG ACTCAGCTAT TGCTTTTGGT
ATTGAACCTA AGGTAGCACT CCTCTCCTAC TCTTCTGGTA ATTCTGGTAG TGGTGCCGAT
GTAGACAAAG TGCGTGAAGC AACAGCACTT GTAAAAGAGC GTCGCCCCGA GTTACTCGTA
GAAGGACCTA TACAATATGA CGCTGCGGTA GACCCAAAAG TAGGGAAACA AAAGATGCCA
AATTCACCTG TAGCAGGACA AGCCAATGTG CTTATTTTCC CCGACCTTAA CACCGGTAAT
AACACCTATA AGGCGGTGCA ACGCGAAACA GGCGGTTTAG CCATAGGTCC TATGCTACAA
GGATTAAAGA AACCCGTAAA CGACCTCAGT CGTGGGGCTC TTATCCCGGA TATTTACAAC
ACTGTACTTA TCACTGCGAT ACAATCAGAG TTTTAG
 
Protein sequence
MNKSVYIIAT NAHSGKSVVS LGVLQMIMRN TAKVGYFRPI VESKSKKDTF IETVLEHFQL 
DMSYDEAYAY TRQEVIALKN EGNIGEVYDT IIKKYKALES KFDFVLVDSS STIDDSYFDT
NFNASVAQSL NIPALIVLKD NFSSEVELVN QVQEDLNNFL EKDLRVLSVF VNKATNATAD
TLSKLEQRFK DITFTLIPRK EELSRPTIRE IANALNVEFL YKGDNIDVTT KRTIVGAMQL
SNYLAKLNED TLAVLPTDRI DLIAGSLVAN YSNFSNIKGV VLYGDLTPDP SMSKILDGIQ
KNIPIMIAKT DTFETANIIG NTKSSIYPEN TEKVKMLLQL FDENVDAAKL NSSIASFKSE
TITPRMFQYN MVQKARAGQK RIVLPEGTDD RILTAASQLA EDELVYLTIL GEPEAIKTRA
KNILGLKWNE ERISIINPAE SDKYEAYAEK LYELRKSKGL ELSQAKDLML DASYFGTMMV
FLGDADGMVS GAVNTTAHTI RPSLQFVKTK PGVNTVSSVF FMLLHDRVLV YGDCAVVPNP
TAEQLADIAI SSADSAIAFG IEPKVALLSY SSGNSGSGAD VDKVREATAL VKERRPELLV
EGPIQYDAAV DPKVGKQKMP NSPVAGQANV LIFPDLNTGN NTYKAVQRET GGLAIGPMLQ
GLKKPVNDLS RGALIPDIYN TVLITAIQSE F